Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184956
Identifier: 159184956
GI number: 159184956
Start: 1847538
End: 1848056
Strand: Reverse
Name: 159184956
Synonym: Atu1869
Alternate gene names: NA
Gene position: 1848056-1847538 (Counterclockwise)
Preceding gene: 15889172
Following gene: 159184955
Centisome position: 65.04
GC content: 57.61
Gene sequence:
>519_bases CTGCTTCTGACTGCCGCCGTCCTCTTTTCCCACAGCGCCCTAGCGGCAGGGCCTGCCGATCCCGTCCAGAAGGTGATGGA CATCACCGTCAAGAACTGGTCAGGCGATGCGGAAAACTGGAAGTATATTTTCGATGAGGACATGCTGACGAGCCTGTTCA GCAAGGACTTCGTCGCCCAATATCGCGAAGCATCCAAAAAGCCGGCTTACGAAGCGGAAAGCGGGGAAAAGGGCGATCCT TTCGGTTATGACGTCGTGACCAACTCCCAGGATGGTTGTCCGCTGCAGGAAGTTTCGGTGACCCCGGGTGCGGTGAAGGA CGGCGTGACCGATGTGACGGCGAAATTCAAACTCTGGGCCTGCATGGACGAGGCGGAGATAAAGGCGACTGTCGACGAGG TGCATTTCGACGTGATCGAGGAAGATGGCCGGCCTGTCATCAGCGATATTCACCGTGTGGGCGACGAGGGCAGGGATTCG CTGCGCGAAGAGATGGCGAATATCATCAAGGGGGAGTGA
Upstream 100 bases:
>100_bases ACGCTTTGCGCATTGCCAAACCACAATGCCGGAATACAGTCAGGCGAATCGCTTCGCCCGCGTGTCGGGCCTATCCCGGG ATCACATCATGCGGAAAATT
Downstream 100 bases:
>100_bases GGGCAGCCTTTATACCCCTCCGGCTTTGATTTTCGCGCTGATCTGTGCCAGTGAGGCGCGCTTTAGGGCATCGTTGAAAA ATCGATGCCGCGCTTCAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MLLTAAVLFSHSALAAGPADPVQKVMDITVKNWSGDAENWKYIFDEDMLTSLFSKDFVAQYREASKKPAYEAESGEKGDP FGYDVVTNSQDGCPLQEVSVTPGAVKDGVTDVTAKFKLWACMDEAEIKATVDEVHFDVIEEDGRPVISDIHRVGDEGRDS LREEMANIIKGE
Sequences:
>Translated_172_residues MLLTAAVLFSHSALAAGPADPVQKVMDITVKNWSGDAENWKYIFDEDMLTSLFSKDFVAQYREASKKPAYEAESGEKGDP FGYDVVTNSQDGCPLQEVSVTPGAVKDGVTDVTAKFKLWACMDEAEIKATVDEVHFDVIEEDGRPVISDIHRVGDEGRDS LREEMANIIKGE >Mature_172_residues MLLTAAVLFSHSALAAGPADPVQKVMDITVKNWSGDAENWKYIFDEDMLTSLFSKDFVAQYREASKKPAYEAESGEKGDP FGYDVVTNSQDGCPLQEVSVTPGAVKDGVTDVTAKFKLWACMDEAEIKATVDEVHFDVIEEDGRPVISDIHRVGDEGRDS LREEMANIIKGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18907; Mature: 18907
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTAAVLFSHSALAAGPADPVQKVMDITVKNWSGDAENWKYIFDEDMLTSLFSKDFVAQ CHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHH YREASKKPAYEAESGEKGDPFGYDVVTNSQDGCPLQEVSVTPGAVKDGVTDVTAKFKLWA HHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCCHHCCCHHHHHHHHHEE CMDEAEIKATVDEVHFDVIEEDGRPVISDIHRVGDEGRDSLREEMANIIKGE ECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MLLTAAVLFSHSALAAGPADPVQKVMDITVKNWSGDAENWKYIFDEDMLTSLFSKDFVAQ CHHHHHHHHHCCHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHHHHH YREASKKPAYEAESGEKGDPFGYDVVTNSQDGCPLQEVSVTPGAVKDGVTDVTAKFKLWA HHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHCCCCCCCCHHCCCHHHHHHHHHEE CMDEAEIKATVDEVHFDVIEEDGRPVISDIHRVGDEGRDSLREEMANIIKGE ECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA