Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is macB [H]
Identifier: 159184931
GI number: 159184931
Start: 1797055
End: 1798263
Strand: Direct
Name: macB [H]
Synonym: Atu1817
Alternate gene names: 159184931
Gene position: 1797055-1798263 (Clockwise)
Preceding gene: 15889119
Following gene: 159184932
Centisome position: 63.24
GC content: 61.95
Gene sequence:
>1209_bases ATGTTCTTTGAAACGTCACGTCTTGCGCTGCGCGCCATCAGCCGCAACCTTTTGCGCTCTTTCCTCACAGTGCTTGGCGT CGTCATTGGTGTGGCCGCCGTCATCGCCATGGTCACCATCGGCAATGGCACGACGGAACAGGTGAAATCGGAACTGTCGC GGCTCGGTACCAACATGCTGTTCGTGCGCCCCGGTCAGTTCGGCCCCGGCCGCGCCAGCACCGAGGCGAAACGTTTCGAT GACCGCGATGTCGAGGCCATCCGCAACCAGATATCAGGCATCCGCGCCGTCGCGCCACAGAACCGCAGTTCCGCGGCCAC TGTCATTTTCGGCGGCAAGAACCACCAGACGAGCGTCATCGGCACCACCAACGATTACCTGATCGCCCAGGACTGGACCA TCGCGCTCGGCCGCGACTTCCAGCCCGCCGAAGATCGTGGCGGCCAGATCGGCTGCATCATCGGTGAAACGGTGCGCCAA GAACTGTTTGGCGCGGAAAACCCTGTGGGTCAGACCATTCGCGTCAGCAATATCTCCTGCCCCGTCATCGGTGTCCTCGC CAGAAAAGGCCAGTCCGGCCTCGGGGACGATCAGGACGACACCATCATCATGCCGCTCAAAATCCACCAGCGGCGCATCG GCGGCACCACCACCATCTCCTCGATCATGGTCTCGGCACAGGACGGCGTTTCCACCGCCAAGGTGCAGAGCGACCTGCAG AACCTGCTGCGTGAGCGGCGGCGCATCAACATTGGCCGCGAGGATGATTTCACCGTCAACGACATGACACAGATCGCCTC TGCCATGACCGGCACGACGACACTGCTCACCGGGCTTTTGGGTGCGGTCGCCGCCGTCAGCCTTCTTGTCGGCGGCATCG GCATCATGAACATCATGCTGGTGTCGGTGACAGAACGCACCCGCGAAATCGGCATTCGCCTTGCCATCGGCGCGCTGGAA AAACAGGTGCTGACGCAGTTTCTGGTGGAAGCCGTCATGCTGTCGGCCTTCGGCGGCATCGTCGGCATTCTGACGGGTCT CGGCCTCGCCTATAGCGTCGTCAGCTTCCTCAACGTGCCTTTCGTCACCAGCCCGTCGATCATCTTCCTCGCCTTCGCCT TTTCAGCGGCCATCGGGGTGATTTTCGGCTATTTTCCGGCGCGGCGGGCAGCGAGTTTGAGCCCGATCGAGGCGCTGCGG CATGAGTGA
Upstream 100 bases:
>100_bases ACCCATGAAGAGGATATTGCTGCCCACGCCGGACGCCTGTTGCGCTTTGTCGATGGCCACCTCGCCTCCGACAGCGCGGC CGACGAAAAGGAGACATCCG
Downstream 100 bases:
>100_bases GGAAAGCCGTCGAGGCTGCAACGGCTTCGAGCGAATAGGTTCACAAATTGCCGGAAGGGGTTTCTATGTTCAAATCGGTA TCGGACAGCGCGGCTGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MFFETSRLALRAISRNLLRSFLTVLGVVIGVAAVIAMVTIGNGTTEQVKSELSRLGTNMLFVRPGQFGPGRASTEAKRFD DRDVEAIRNQISGIRAVAPQNRSSAATVIFGGKNHQTSVIGTTNDYLIAQDWTIALGRDFQPAEDRGGQIGCIIGETVRQ ELFGAENPVGQTIRVSNISCPVIGVLARKGQSGLGDDQDDTIIMPLKIHQRRIGGTTTISSIMVSAQDGVSTAKVQSDLQ NLLRERRRINIGREDDFTVNDMTQIASAMTGTTTLLTGLLGAVAAVSLLVGGIGIMNIMLVSVTERTREIGIRLAIGALE KQVLTQFLVEAVMLSAFGGIVGILTGLGLAYSVVSFLNVPFVTSPSIIFLAFAFSAAIGVIFGYFPARRAASLSPIEALR HE
Sequences:
>Translated_402_residues MFFETSRLALRAISRNLLRSFLTVLGVVIGVAAVIAMVTIGNGTTEQVKSELSRLGTNMLFVRPGQFGPGRASTEAKRFD DRDVEAIRNQISGIRAVAPQNRSSAATVIFGGKNHQTSVIGTTNDYLIAQDWTIALGRDFQPAEDRGGQIGCIIGETVRQ ELFGAENPVGQTIRVSNISCPVIGVLARKGQSGLGDDQDDTIIMPLKIHQRRIGGTTTISSIMVSAQDGVSTAKVQSDLQ NLLRERRRINIGREDDFTVNDMTQIASAMTGTTTLLTGLLGAVAAVSLLVGGIGIMNIMLVSVTERTREIGIRLAIGALE KQVLTQFLVEAVMLSAFGGIVGILTGLGLAYSVVSFLNVPFVTSPSIIFLAFAFSAAIGVIFGYFPARRAASLSPIEALR HE >Mature_402_residues MFFETSRLALRAISRNLLRSFLTVLGVVIGVAAVIAMVTIGNGTTEQVKSELSRLGTNMLFVRPGQFGPGRASTEAKRFD DRDVEAIRNQISGIRAVAPQNRSSAATVIFGGKNHQTSVIGTTNDYLIAQDWTIALGRDFQPAEDRGGQIGCIIGETVRQ ELFGAENPVGQTIRVSNISCPVIGVLARKGQSGLGDDQDDTIIMPLKIHQRRIGGTTTISSIMVSAQDGVSTAKVQSDLQ NLLRERRRINIGREDDFTVNDMTQIASAMTGTTTLLTGLLGAVAAVSLLVGGIGIMNIMLVSVTERTREIGIRLAIGALE KQVLTQFLVEAVMLSAFGGIVGILTGLGLAYSVVSFLNVPFVTSPSIIFLAFAFSAAIGVIFGYFPARRAASLSPIEALR HE
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=410, Percent_Identity=36.0975609756098, Blast_Score=200, Evalue=1e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 42895; Mature: 42895
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFETSRLALRAISRNLLRSFLTVLGVVIGVAAVIAMVTIGNGTTEQVKSELSRLGTNML CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEE FVRPGQFGPGRASTEAKRFDDRDVEAIRNQISGIRAVAPQNRSSAATVIFGGKNHQTSVI EEECCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCCCEEEE GTTNDYLIAQDWTIALGRDFQPAEDRGGQIGCIIGETVRQELFGAENPVGQTIRVSNISC ECCCCEEEECCEEEEECCCCCCHHHCCCEEEEEEHHHHHHHHCCCCCCCCCEEEECCCCC PVIGVLARKGQSGLGDDQDDTIIMPLKIHQRRIGGTTTISSIMVSAQDGVSTAKVQSDLQ HHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH NLLRERRRINIGREDDFTVNDMTQIASAMTGTTTLLTGLLGAVAAVSLLVGGIGIMNIML HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSVTERTREIGIRLAIGALEKQVLTQFLVEAVMLSAFGGIVGILTGLGLAYSVVSFLNVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FVTSPSIIFLAFAFSAAIGVIFGYFPARRAASLSPIEALRHE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC >Mature Secondary Structure MFFETSRLALRAISRNLLRSFLTVLGVVIGVAAVIAMVTIGNGTTEQVKSELSRLGTNML CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEE FVRPGQFGPGRASTEAKRFDDRDVEAIRNQISGIRAVAPQNRSSAATVIFGGKNHQTSVI EEECCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCEEECCCCCCCCEEEEECCCCCCEEEE GTTNDYLIAQDWTIALGRDFQPAEDRGGQIGCIIGETVRQELFGAENPVGQTIRVSNISC ECCCCEEEECCEEEEECCCCCCHHHCCCEEEEEEHHHHHHHHCCCCCCCCCEEEECCCCC PVIGVLARKGQSGLGDDQDDTIIMPLKIHQRRIGGTTTISSIMVSAQDGVSTAKVQSDLQ HHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH NLLRERRRINIGREDDFTVNDMTQIASAMTGTTTLLTGLLGAVAAVSLLVGGIGIMNIML HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSVTERTREIGIRLAIGALEKQVLTQFLVEAVMLSAFGGIVGILTGLGLAYSVVSFLNVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FVTSPSIIFLAFAFSAAIGVIFGYFPARRAASLSPIEALRHE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA