Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184910
Identifier: 159184910
GI number: 159184910
Start: 1757191
End: 1757847
Strand: Reverse
Name: 159184910
Synonym: Atu1773
Alternate gene names: NA
Gene position: 1757847-1757191 (Counterclockwise)
Preceding gene: 15889080
Following gene: 159184908
Centisome position: 61.86
GC content: 61.95
Gene sequence:
>657_bases ATGATGCAAAAGGCAAACACATTCACCCGGACGGCTCTGTCCGCTCTGGTCCTCTCTCTGGGCGCGGTTTCCGCTCCGGC CATCTCGCAGGCGCAGGATGCTGCCCCGGCCGCTCAGGGCGGCGCTGGCGCTCCGCCGCTCGGCTGGTTCAAGACCTGCT CCAAGCAGGAAGACAACGATGTCTGCGTCGTGCAGAACGTGGTTCTCGCCCAGAACGGCCAGATGATCACCGCTGTCGGC CTTATCACCGTTGAAGGCAAGGTCAACCGCAAGCTGCTGCAGGTTTCCGTTCCGACCGCGCGTCTCATTCCCCCGGGTGT GATGATGCAGATCGATGGCGGCAAGGGCCAGAAGCTCGATTACGCCGTTTGCCTTCCCGACAAGTGCACGGCCGAAGTTC CGCTGACGGATGCCATGATTGCTTCGCTGAAGAAGGGTAGCGAGGTGGTTTTCACCTCCATCAACTTCCGCCGCGCGCCT AACCCCATCAAGATTGCGCTCTCCGGTTTCACCGGCGCATACGACGGTGCTGCCATCACTCAGTCGCAGCTGGCCGAAAG CCAGCGCAGCCTGCAGGAAGGCATGCAGAAGAAGGCTGAAGAGGCCCGCAAGAAGCTGGAAGCTGCTCAGGACGCTGCCA AGGCTCCCAAGCCCTGA
Upstream 100 bases:
>100_bases CTCATTTAAACGACAGTTGAACGGGCAGAAGGATACCGCCATCGGCGGACAGGGCCTTGAAGGGTTCTGTTCTGGCAGAC ATTCAGGAGACGGAACTCTT
Downstream 100 bases:
>100_bases TCGCTACAAAGCATCAAGAATGACAAAACCGGTCTGGCAACAGACCGGTTTTTTTATGCGCGCTTTATGTCCCTGGGAGG GGGGAGATGGTTGGCAGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Invasion Associated Locus B Family Protein; Invasion-Associated Protein; Signal Peptide; Invasion Associated Locus B Protein; Signal Peptide Protein
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MMQKANTFTRTALSALVLSLGAVSAPAISQAQDAAPAAQGGAGAPPLGWFKTCSKQEDNDVCVVQNVVLAQNGQMITAVG LITVEGKVNRKLLQVSVPTARLIPPGVMMQIDGGKGQKLDYAVCLPDKCTAEVPLTDAMIASLKKGSEVVFTSINFRRAP NPIKIALSGFTGAYDGAAITQSQLAESQRSLQEGMQKKAEEARKKLEAAQDAAKAPKP
Sequences:
>Translated_218_residues MMQKANTFTRTALSALVLSLGAVSAPAISQAQDAAPAAQGGAGAPPLGWFKTCSKQEDNDVCVVQNVVLAQNGQMITAVG LITVEGKVNRKLLQVSVPTARLIPPGVMMQIDGGKGQKLDYAVCLPDKCTAEVPLTDAMIASLKKGSEVVFTSINFRRAP NPIKIALSGFTGAYDGAAITQSQLAESQRSLQEGMQKKAEEARKKLEAAQDAAKAPKP >Mature_218_residues MMQKANTFTRTALSALVLSLGAVSAPAISQAQDAAPAAQGGAGAPPLGWFKTCSKQEDNDVCVVQNVVLAQNGQMITAVG LITVEGKVNRKLLQVSVPTARLIPPGVMMQIDGGKGQKLDYAVCLPDKCTAEVPLTDAMIASLKKGSEVVFTSINFRRAP NPIKIALSGFTGAYDGAAITQSQLAESQRSLQEGMQKKAEEARKKLEAAQDAAKAPKP
Specific function: Unknown
COG id: COG5342
COG function: function code R; Invasion protein B, involved in pathogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22822; Mature: 22822
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQKANTFTRTALSALVLSLGAVSAPAISQAQDAAPAAQGGAGAPPLGWFKTCSKQEDND CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCC VCVVQNVVLAQNGQMITAVGLITVEGKVNRKLLQVSVPTARLIPPGVMMQIDGGKGQKLD EEEEEEEEECCCCCEEEEEEEEEECCCCCCEEEEEECCCHHCCCCCEEEEECCCCCCEEE YAVCLPDKCTAEVPLTDAMIASLKKGSEVVFTSINFRRAPNPIKIALSGFTGAYDGAAIT EEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCHHH QSQLAESQRSLQEGMQKKAEEARKKLEAAQDAAKAPKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMQKANTFTRTALSALVLSLGAVSAPAISQAQDAAPAAQGGAGAPPLGWFKTCSKQEDND CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCC VCVVQNVVLAQNGQMITAVGLITVEGKVNRKLLQVSVPTARLIPPGVMMQIDGGKGQKLD EEEEEEEEECCCCCEEEEEEEEEECCCCCCEEEEEECCCHHCCCCCEEEEECCCCCCEEE YAVCLPDKCTAEVPLTDAMIASLKKGSEVVFTSINFRRAPNPIKIALSGFTGAYDGAAIT EEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCHHH QSQLAESQRSLQEGMQKKAEEARKKLEAAQDAAKAPKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA