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The map label for this gene is glxA [H]

Identifier: 159184907

GI number: 159184907

Start: 1750875

End: 1751915

Strand: Direct

Name: glxA [H]

Synonym: Atu1767

Alternate gene names: 159184907

Gene position: 1750875-1751915 (Clockwise)

Preceding gene: 159184906

Following gene: 159184909

Centisome position: 61.62

GC content: 61.38

Gene sequence:

>1041_bases
ATGAGCAGAAACTCCCAGAAGAAACGCTCAATCGTCTTTTTTCTCATTCCGCAATTTACCATGCTGCCGTTCGCCGCAGC
GGTTGAAACGCTTCGCATCGCCAACCGAATGTTGGGTTATGCCGCCTATGAATGGCGCCTCTCCTCACTCGACGGCCAGA
AGGTCATGTCGTCAAGCGGCATCTGTCTTGAAGTCGATACCTGTCTTGCCGATGAGCGGCGATACGTCAGCGGCGAAAAC
CGCCCGGAAATGGCGATCATCTGTTCGGGCATCGATGTGGATCAACACGTCAACAAGTCCGTCAATGCCTGGCTGCGCGA
AGCCTATAATCGCGGCATCGCCATCGGCAGCCTCTGTACCGCCGCCCATATCCTCGCACAGGCGGGCCTCCTCAATGGCA
AGCGCTGCGCGATCCACTGGGAAAACCTGCCGGGCTTCTCCGAGGCCTTCCCGCAGGTGGAAGTCTATGCCGATCTCTTC
GAAGTCGACAGCAACATCTACACCTGCGCCGGCGGCACGGCCTCGCTGGACATGATGCTGAGCCTGATCGGCCAGGATTT
CGGCGAAAACCTCGTCAACCGCGTCTGCGAGCAGCAATTGACCGATCGGGTCCGCAGCCCCAACGACCGCCAGCGCCTGC
CGCTGCGCGCCCGCCTCGGCGTGCAGAACAGCAAGGTCCTGTCGATCATCGAGCTGATGGAAGGCAACCTCTCCGAACCG
CTGTCGCTGCTCGACATAGCCGACGCCGCCGATCTCTCGCGCCGGCAGGTGGAGCGTCTTTTCCGGCAGGAAATGGGCCG
CTCCCCCGCCCGCTATTATCTCGAAATCCGCCTCGACCGTGCCCGCCACCTGCTCGTGCAGTCGGCCATGCCGGTGGTGG
AAGTCGCGGTCGCCTGCGGCTTCGTCTCGGCCTCGCATTTTTCCAAGTGTTATCGCGAAATCTACAATCGCACGCCGCAG
CAGGAGCGCGCCGAACGCAAGCTGCTGATCAGTGCTTCGCGGATGGCCATGGCGAGCCAGGGAGGTAAGGCCGCGCATTG
A

Upstream 100 bases:

>100_bases
CGATTCCGAGGCGTATTTTTCGTTAAAGATGTCGTAATCAGGACATCCAGAAGACCAATTCCAAGGGAGGAATTGCGTAT
TCGCAACGGAGCACGGGCAA

Downstream 100 bases:

>100_bases
CGCGTGGCTTTGGCATCTGGGGCTTTTCAGCGACGAAAACACCTCCTCCGTCATACCGGCTAGTTCGGGAGGCGGCGCGC
AAGATCACCCAAACGGTCGA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MSRNSQKKRSIVFFLIPQFTMLPFAAAVETLRIANRMLGYAAYEWRLSSLDGQKVMSSSGICLEVDTCLADERRYVSGEN
RPEMAIICSGIDVDQHVNKSVNAWLREAYNRGIAIGSLCTAAHILAQAGLLNGKRCAIHWENLPGFSEAFPQVEVYADLF
EVDSNIYTCAGGTASLDMMLSLIGQDFGENLVNRVCEQQLTDRVRSPNDRQRLPLRARLGVQNSKVLSIIELMEGNLSEP
LSLLDIADAADLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLVQSAMPVVEVAVACGFVSASHFSKCYREIYNRTPQ
QERAERKLLISASRMAMASQGGKAAH

Sequences:

>Translated_346_residues
MSRNSQKKRSIVFFLIPQFTMLPFAAAVETLRIANRMLGYAAYEWRLSSLDGQKVMSSSGICLEVDTCLADERRYVSGEN
RPEMAIICSGIDVDQHVNKSVNAWLREAYNRGIAIGSLCTAAHILAQAGLLNGKRCAIHWENLPGFSEAFPQVEVYADLF
EVDSNIYTCAGGTASLDMMLSLIGQDFGENLVNRVCEQQLTDRVRSPNDRQRLPLRARLGVQNSKVLSIIELMEGNLSEP
LSLLDIADAADLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLVQSAMPVVEVAVACGFVSASHFSKCYREIYNRTPQ
QERAERKLLISASRMAMASQGGKAAH
>Mature_345_residues
SRNSQKKRSIVFFLIPQFTMLPFAAAVETLRIANRMLGYAAYEWRLSSLDGQKVMSSSGICLEVDTCLADERRYVSGENR
PEMAIICSGIDVDQHVNKSVNAWLREAYNRGIAIGSLCTAAHILAQAGLLNGKRCAIHWENLPGFSEAFPQVEVYADLFE
VDSNIYTCAGGTASLDMMLSLIGQDFGENLVNRVCEQQLTDRVRSPNDRQRLPLRARLGVQNSKVLSIIELMEGNLSEPL
SLLDIADAADLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLVQSAMPVVEVAVACGFVSASHFSKCYREIYNRTPQQ
ERAERKLLISASRMAMASQGGKAAH

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=103, Percent_Identity=33.0097087378641, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38697; Mature: 38566

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNSQKKRSIVFFLIPQFTMLPFAAAVETLRIANRMLGYAAYEWRLSSLDGQKVMSSSG
CCCCCCCHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCC
ICLEVDTCLADERRYVSGENRPEMAIICSGIDVDQHVNKSVNAWLREAYNRGIAIGSLCT
CEEEEHHHHCCCHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AAHILAQAGLLNGKRCAIHWENLPGFSEAFPQVEVYADLFEVDSNIYTCAGGTASLDMML
HHHHHHHHCCCCCCEEEEEECCCCCHHHHCCHHHHHHHHHHHCCCEEEECCCCHHHHHHH
SLIGQDFGENLVNRVCEQQLTDRVRSPNDRQRLPLRARLGVQNSKVLSIIELMEGNLSEP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHCCCCCHHHHHHHHHHCCCCCCC
LSLLDIADAADLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLVQSAMPVVEVAVACG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEHHHHHHHHHHHCCHHHHHHHHHH
FVSASHFSKCYREIYNRTPQQERAERKLLISASRMAMASQGGKAAH
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SRNSQKKRSIVFFLIPQFTMLPFAAAVETLRIANRMLGYAAYEWRLSSLDGQKVMSSSG
CCCCCCHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCC
ICLEVDTCLADERRYVSGENRPEMAIICSGIDVDQHVNKSVNAWLREAYNRGIAIGSLCT
CEEEEHHHHCCCHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AAHILAQAGLLNGKRCAIHWENLPGFSEAFPQVEVYADLFEVDSNIYTCAGGTASLDMML
HHHHHHHHCCCCCCEEEEEECCCCCHHHHCCHHHHHHHHHHHCCCEEEECCCCHHHHHHH
SLIGQDFGENLVNRVCEQQLTDRVRSPNDRQRLPLRARLGVQNSKVLSIIELMEGNLSEP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCHHHHCCCCCHHHHHHHHHHCCCCCCC
LSLLDIADAADLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLVQSAMPVVEVAVACG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEHHHHHHHHHHHCCHHHHHHHHHH
FVSASHFSKCYREIYNRTPQQERAERKLLISASRMAMASQGGKAAH
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]