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The map label for this gene is ydjA [H]

Identifier: 159184896

GI number: 159184896

Start: 1730703

End: 1731284

Strand: Reverse

Name: ydjA [H]

Synonym: Atu1744

Alternate gene names: 159184896

Gene position: 1731284-1730703 (Counterclockwise)

Preceding gene: 15889049

Following gene: 15889046

Centisome position: 60.93

GC content: 61.86

Gene sequence:

>582_bases
ATGACCAGCGATATCAAACTCCTCGATTACCTCAGGGTTCGCCGCTCCACGCCGGCCCTGCAACTCAGCGAACCCGGCCC
TTCGAAAGGGGAAATCGAGGAAATCCTTCGCCTTGCCGTGCGCGTGCCCGACCATGGCAAGCTCGCCCCCTGGCGTTTCG
TCGTTTATCGCGGCGAGGAGCGGGTACGTCTTAGTGAGGCGGCGCTCAGGATCGCGCTCGAGAAGAACCCCGATCTCGAT
CTGCAGCAGCAGGAGGCGGAGCGTACGCGCTTTACCCGCGCGCCCGTCGTCATCGCCGTCATCAGCACCGCAAAACCGCA
TTTCAAAATCCCGGAATGGGAACAGGTCATGTCCGCCGGTGCCGTTTGCCTCAACGTCATCTTCGCGGCCAATGCCAGCG
GTTTTGCAGCGAACTGGCTGACGGAGTGGCTTGCTTTCGATCCGGCCTTCCTTGCGGAGATCGGTGTCAGTGCGGAAGAG
AAGGTCGCGGGCTACATTCACATCGGCTCAACGACGTTTCCGCCGGTGGAGCGGCCACGCCCCGAGTTGGCGGATGTCGT
TACCTGGGTTGGTGACGTCTGA

Upstream 100 bases:

>100_bases
CGATTGACTTCTTGTTTTTCCCGGATCACTTCAAAACCAATGCCATGGCTATTTCAAGGCCCTAGTTTCGCGATGACAGC
AGAATGGAAGATTTTTGATC

Downstream 100 bases:

>100_bases
TGTTTTATACGACCGACACCAATCAGCACGGCCTGCCGCATGATCCATTCAAGGCGATCGTCGCGCCGCGGCCGATCGGC
TGGATCGGTTCGAAGGGCAG

Product: nitroreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTSDIKLLDYLRVRRSTPALQLSEPGPSKGEIEEILRLAVRVPDHGKLAPWRFVVYRGEERVRLSEAALRIALEKNPDLD
LQQQEAERTRFTRAPVVIAVISTAKPHFKIPEWEQVMSAGAVCLNVIFAANASGFAANWLTEWLAFDPAFLAEIGVSAEE
KVAGYIHIGSTTFPPVERPRPELADVVTWVGDV

Sequences:

>Translated_193_residues
MTSDIKLLDYLRVRRSTPALQLSEPGPSKGEIEEILRLAVRVPDHGKLAPWRFVVYRGEERVRLSEAALRIALEKNPDLD
LQQQEAERTRFTRAPVVIAVISTAKPHFKIPEWEQVMSAGAVCLNVIFAANASGFAANWLTEWLAFDPAFLAEIGVSAEE
KVAGYIHIGSTTFPPVERPRPELADVVTWVGDV
>Mature_192_residues
TSDIKLLDYLRVRRSTPALQLSEPGPSKGEIEEILRLAVRVPDHGKLAPWRFVVYRGEERVRLSEAALRIALEKNPDLDL
QQQEAERTRFTRAPVVIAVISTAKPHFKIPEWEQVMSAGAVCLNVIFAANASGFAANWLTEWLAFDPAFLAEIGVSAEEK
VAGYIHIGSTTFPPVERPRPELADVVTWVGDV

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=163, Percent_Identity=34.9693251533742, Blast_Score=101, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 21486; Mature: 21355

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSDIKLLDYLRVRRSTPALQLSEPGPSKGEIEEILRLAVRVPDHGKLAPWRFVVYRGEE
CCCCHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
RVRLSEAALRIALEKNPDLDLQQQEAERTRFTRAPVVIAVISTAKPHFKIPEWEQVMSAG
HHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHH
AVCLNVIFAANASGFAANWLTEWLAFDPAFLAEIGVSAEEKVAGYIHIGSTTFPPVERPR
HHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHEEEEEEECCCCCCCCCCCC
PELADVVTWVGDV
HHHHHHHHHHCCC
>Mature Secondary Structure 
TSDIKLLDYLRVRRSTPALQLSEPGPSKGEIEEILRLAVRVPDHGKLAPWRFVVYRGEE
CCCHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
RVRLSEAALRIALEKNPDLDLQQQEAERTRFTRAPVVIAVISTAKPHFKIPEWEQVMSAG
HHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHH
AVCLNVIFAANASGFAANWLTEWLAFDPAFLAEIGVSAEEKVAGYIHIGSTTFPPVERPR
HHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCHHEEEEEEECCCCCCCCCCCC
PELADVVTWVGDV
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]