Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184849
Identifier: 159184849
GI number: 159184849
Start: 1625641
End: 1626096
Strand: Reverse
Name: 159184849
Synonym: Atu1638
Alternate gene names: NA
Gene position: 1626096-1625641 (Counterclockwise)
Preceding gene: 159184850
Following gene: 15888947
Centisome position: 57.23
GC content: 60.75
Gene sequence:
>456_bases ATGGCTGCGTCTGACGTATTCATCGCTGACCTCCATAATGTTCACTTTATGTTCTCATTATTGGTGGCTTGTGTCAACAC TATGGCACGGTTTCTGACGGGCCAACGATATGTGTTTGAGGATGAGCATGGCCTGAAACAGGGCAGCCGGCCGCGAGGTC ATACGAGACCGACTCCAGCTGCGTGGCGGCTTCCACGACGCGAGCCAGCGTTCCGGCAGTGTCGGTCGGGACACTCCGGG TCTGCAGGGTCGATTTTCGTTATGATGTCTCGATATGACGGGGCGCTGATCCGCCCGGCATCAGAAGGGGATCAGGAGAG GGGGCGTTGGTCCGGCGCGGGGAGGCCGCCGGCGGTCAGGAGATCGGTGAGATGCTCGCTGGCGAGCGCGACGATGGCAA GGGCGGCCTGCTGGCGGTTCCAGCCGGCATGTTCCGCTTTTTCGATCAGCCCTTGA
Upstream 100 bases:
>100_bases GGTGATGATGACTTCCGTGCGGCGTTGCAGTTCGCGGCGCCGTTCAAGCGCGCGCTCACGCATGTCGCGGGAGCGGGCGA CGACGGAAAGGGCATTTTCT
Downstream 100 bases:
>100_bases ATGGAAGGCTCCAGTGCGAATTGGCACTCGGCCTGATAGTCCATGGTGTCGATCGAAAGCGACGGGGAATTAATTGCGGC CCGCATCCTTTGGTCTCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MAASDVFIADLHNVHFMFSLLVACVNTMARFLTGQRYVFEDEHGLKQGSRPRGHTRPTPAAWRLPRREPAFRQCRSGHSG SAGSIFVMMSRYDGALIRPASEGDQERGRWSGAGRPPAVRRSVRCSLASATMARAACWRFQPACSAFSISP
Sequences:
>Translated_151_residues MAASDVFIADLHNVHFMFSLLVACVNTMARFLTGQRYVFEDEHGLKQGSRPRGHTRPTPAAWRLPRREPAFRQCRSGHSG SAGSIFVMMSRYDGALIRPASEGDQERGRWSGAGRPPAVRRSVRCSLASATMARAACWRFQPACSAFSISP >Mature_150_residues AASDVFIADLHNVHFMFSLLVACVNTMARFLTGQRYVFEDEHGLKQGSRPRGHTRPTPAAWRLPRREPAFRQCRSGHSGS AGSIFVMMSRYDGALIRPASEGDQERGRWSGAGRPPAVRRSVRCSLASATMARAACWRFQPACSAFSISP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16685; Mature: 16554
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASDVFIADLHNVHFMFSLLVACVNTMARFLTGQRYVFEDEHGLKQGSRPRGHTRPTPA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCH AWRLPRREPAFRQCRSGHSGSAGSIFVMMSRYDGALIRPASEGDQERGRWSGAGRPPAVR HHCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCCHHCCCCCCCCCCHHHH RSVRCSLASATMARAACWRFQPACSAFSISP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure AASDVFIADLHNVHFMFSLLVACVNTMARFLTGQRYVFEDEHGLKQGSRPRGHTRPTPA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCH AWRLPRREPAFRQCRSGHSGSAGSIFVMMSRYDGALIRPASEGDQERGRWSGAGRPPAVR HHCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCEEECCCCCCCHHCCCCCCCCCCHHHH RSVRCSLASATMARAACWRFQPACSAFSISP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA