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The map label for this gene is aapJ [H]

Identifier: 159184823

GI number: 159184823

Start: 1562468

End: 1563406

Strand: Direct

Name: aapJ [H]

Synonym: Atu1577

Alternate gene names: 159184823

Gene position: 1562468-1563406 (Clockwise)

Preceding gene: 15888892

Following gene: 159184824

Centisome position: 54.99

GC content: 58.79

Gene sequence:

>939_bases
GTGAAGGGCAAAGGTTTCGTCACCTGTGGCGTCAGCGCCGGCATTCCGGGATTCTCCAATCCCGATGACAAGGGCGAATG
GTCCGGCATCGATGTGGACTATTGCCGTGGTATTGCCACAGCGGTTTTCGGTGACCCTTCCAAGGCGAAGTTTGTCGCTC
TTTCGAGCAAGGACCGATTCCCGGCTCTCCAGTCCGGTGAAGTCGACGTTCTGACCCGTAACACCACCTGGACCATCAGC
CGCGACACGTCGCTCGGCTTCAACTTCCGTACCGTCAACTATTATGACGGCCAGGGCTTCATCGCCAAGAAGGGCCTCAA
CGTGAAGTCCGCCCTTGAGCTTTCCGGCGCCGCCGTCTGCGTTCAGACCGGCACCACCACCGAACTCAATCTCGCCGACT
ATTTCAAGACCAACAATCTGCAGTACAATCCGGTGGTTTTCGAAAAGGAATCCGACGCGACGTCTGCTTATGATTCTGGT
CGTTGCGACGTCTACACCACCGACCAGTCGGGTCTCTATGCAATCCGCCTGAAGCTGAAGAACCCTGACGACAACATCGT
TCTGCCTGAGGTCATCTCCAAGGAGCCGCTTGGCCCAGCCGTCCGCCAGGGTGACGACCAGTGGTTCGACATCGTGACCT
GGGTTCATTACGCCATGGTCAACGCCGAAGAACTTGGCATCACCTCCAAGAACGTCGACGAACAGAAGACCAGCGCCAAC
CCGGACGTGAAGCGTCTGCTCGGCACGGAAGAAGGCACCAAGATCGGTACCGATCTCGGCGTTGGCAATGACTGGGCCTA
CAACATCGTCAAGCTGGTGGGCAACTACGGCGAAGTCTTCGACCGCAACGTCGGCGCAGGCTCTCCGCTGAAGATCGAGC
GCGGCCAGAACGCGCTGTGGACCAAGGGCGGCCTGCAATACGCACCGCCGGTCCGTTGA

Upstream 100 bases:

>100_bases
CAAAAGGTTGGGAAAAATGAAAAAGGCAATTCTGTCGGCCGCTATCGGCGCAGCAGTTTTGGGAGGAGCCTCGGTCGCTT
CGGCTGCGACGCTTCAGGAT

Downstream 100 bases:

>100_bases
TCGGCCCCATCATCGGCTAGATCACGACGGGAGGCTGGGCAACGCCCGGCCTCCATTTTAGAATTATATAAATAAGCTCG
CAAAGAGCATATAAAAGGGA

Product: ABC transporter, substrate binding protein (amino acid)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MKGKGFVTCGVSAGIPGFSNPDDKGEWSGIDVDYCRGIATAVFGDPSKAKFVALSSKDRFPALQSGEVDVLTRNTTWTIS
RDTSLGFNFRTVNYYDGQGFIAKKGLNVKSALELSGAAVCVQTGTTTELNLADYFKTNNLQYNPVVFEKESDATSAYDSG
RCDVYTTDQSGLYAIRLKLKNPDDNIVLPEVISKEPLGPAVRQGDDQWFDIVTWVHYAMVNAEELGITSKNVDEQKTSAN
PDVKRLLGTEEGTKIGTDLGVGNDWAYNIVKLVGNYGEVFDRNVGAGSPLKIERGQNALWTKGGLQYAPPVR

Sequences:

>Translated_312_residues
MKGKGFVTCGVSAGIPGFSNPDDKGEWSGIDVDYCRGIATAVFGDPSKAKFVALSSKDRFPALQSGEVDVLTRNTTWTIS
RDTSLGFNFRTVNYYDGQGFIAKKGLNVKSALELSGAAVCVQTGTTTELNLADYFKTNNLQYNPVVFEKESDATSAYDSG
RCDVYTTDQSGLYAIRLKLKNPDDNIVLPEVISKEPLGPAVRQGDDQWFDIVTWVHYAMVNAEELGITSKNVDEQKTSAN
PDVKRLLGTEEGTKIGTDLGVGNDWAYNIVKLVGNYGEVFDRNVGAGSPLKIERGQNALWTKGGLQYAPPVR
>Mature_312_residues
MKGKGFVTCGVSAGIPGFSNPDDKGEWSGIDVDYCRGIATAVFGDPSKAKFVALSSKDRFPALQSGEVDVLTRNTTWTIS
RDTSLGFNFRTVNYYDGQGFIAKKGLNVKSALELSGAAVCVQTGTTTELNLADYFKTNNLQYNPVVFEKESDATSAYDSG
RCDVYTTDQSGLYAIRLKLKNPDDNIVLPEVISKEPLGPAVRQGDDQWFDIVTWVHYAMVNAEELGITSKNVDEQKTSAN
PDVKRLLGTEEGTKIGTDLGVGNDWAYNIVKLVGNYGEVFDRNVGAGSPLKIERGQNALWTKGGLQYAPPVR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=208, Percent_Identity=26.4423076923077, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 33924; Mature: 33924

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGKGFVTCGVSAGIPGFSNPDDKGEWSGIDVDYCRGIATAVFGDPSKAKFVALSSKDRF
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC
PALQSGEVDVLTRNTTWTISRDTSLGFNFRTVNYYDGQGFIAKKGLNVKSALELSGAAVC
CCCCCCCEEEEECCCEEEEECCCCCCEEEEEEEEECCCCEEEECCCCHHHHHCCCCEEEE
VQTGTTTELNLADYFKTNNLQYNPVVFEKESDATSAYDSGRCDVYTTDQSGLYAIRLKLK
EECCCCCEEEHHHHHCCCCEEECCEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEEEE
NPDDNIVLPEVISKEPLGPAVRQGDDQWFDIVTWVHYAMVNAEELGITSKNVDEQKTSAN
CCCCCEECHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHCCCC
PDVKRLLGTEEGTKIGTDLGVGNDWAYNIVKLVGNYGEVFDRNVGAGSPLKIERGQNALW
CHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCEEEECCCCEEE
TKGGLQYAPPVR
ECCCCCCCCCCC
>Mature Secondary Structure
MKGKGFVTCGVSAGIPGFSNPDDKGEWSGIDVDYCRGIATAVFGDPSKAKFVALSSKDRF
CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCC
PALQSGEVDVLTRNTTWTISRDTSLGFNFRTVNYYDGQGFIAKKGLNVKSALELSGAAVC
CCCCCCCEEEEECCCEEEEECCCCCCEEEEEEEEECCCCEEEECCCCHHHHHCCCCEEEE
VQTGTTTELNLADYFKTNNLQYNPVVFEKESDATSAYDSGRCDVYTTDQSGLYAIRLKLK
EECCCCCEEEHHHHHCCCCEEECCEEEECCCCCCCCCCCCCEEEEECCCCCEEEEEEEEE
NPDDNIVLPEVISKEPLGPAVRQGDDQWFDIVTWVHYAMVNAEELGITSKNVDEQKTSAN
CCCCCEECHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHCCCC
PDVKRLLGTEEGTKIGTDLGVGNDWAYNIVKLVGNYGEVFDRNVGAGSPLKIERGQNALW
CHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCCCEEEECCCCEEE
TKGGLQYAPPVR
ECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]