Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184804
Identifier: 159184804
GI number: 159184804
Start: 1524629
End: 1525075
Strand: Direct
Name: 159184804
Synonym: Atu1533
Alternate gene names: NA
Gene position: 1524629-1525075 (Clockwise)
Preceding gene: 159184803
Following gene: 15888861
Centisome position: 53.65
GC content: 55.93
Gene sequence:
>447_bases ATGACTTTGACAACGCCGCCTTTTTCGTTGGTCGGTATCGATCATGTCGTCTTCATCGTCGACGACATGACGCGGGCGCT CGATTTTTACCGGAACGTACTGGGGTGTACGGATGGATACTCCTACCCTGCTCTGGGGATGGAACAAGTCTGGTGCGGAA ACGCCTTGATCGTTCTGTGGGATGTCACGCACCCCGGTGGCACAAAGGCTGCTCCGCCCGTCGCCGGAGGACGTAATGTC GATCACATCTGCATAGCGACCGGTCCTCTGAACCATGACGCGCTTCGCGCACATCTGGCGAAATTTAACGTCACGATAGA ACAGGAAGCCTTTCACGGCGGCGCGAGAGGAATGGGATATTCGTTCTATTTCCGTGATCCCTTCGGCAACAAGATCGAGT TGAAGGGACCAGCCGAATATCCGGACGGACGGGCGGAAAACGCCTGA
Upstream 100 bases:
>100_bases GCGATCTTCGCCTTTCCCGGTGGCCGGCGTTTCCATTTCACCGATCCGGATGGATATGAACTGGCCGTCTGGTCGAAAAA CTGATCGGCAGGAGCCCGCC
Downstream 100 bases:
>100_bases TCTGAAAAGGGCGCCTCGCCGGCGCCCCTTCTTTACATTCTACTTGCCTCATTCGCCCCCACCAAGCGAATGCACGAAGA TCGCCAGCTGTTTGACAGTC
Product: glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein
Products: NA
Alternate protein names: Lactoylglutathione Lyase; Glyoxalase Family Protein; Ring-Cleaving Dioxygenase; Methylmalonyl CoA Epimerase; Dioxygenase Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance; Dioxygenase
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTLTTPPFSLVGIDHVVFIVDDMTRALDFYRNVLGCTDGYSYPALGMEQVWCGNALIVLWDVTHPGGTKAAPPVAGGRNV DHICIATGPLNHDALRAHLAKFNVTIEQEAFHGGARGMGYSFYFRDPFGNKIELKGPAEYPDGRAENA
Sequences:
>Translated_148_residues MTLTTPPFSLVGIDHVVFIVDDMTRALDFYRNVLGCTDGYSYPALGMEQVWCGNALIVLWDVTHPGGTKAAPPVAGGRNV DHICIATGPLNHDALRAHLAKFNVTIEQEAFHGGARGMGYSFYFRDPFGNKIELKGPAEYPDGRAENA >Mature_147_residues TLTTPPFSLVGIDHVVFIVDDMTRALDFYRNVLGCTDGYSYPALGMEQVWCGNALIVLWDVTHPGGTKAAPPVAGGRNVD HICIATGPLNHDALRAHLAKFNVTIEQEAFHGGARGMGYSFYFRDPFGNKIELKGPAEYPDGRAENA
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16096; Mature: 15965
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTTPPFSLVGIDHVVFIVDDMTRALDFYRNVLGCTDGYSYPALGMEQVWCGNALIVLW CCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEEEE DVTHPGGTKAAPPVAGGRNVDHICIATGPLNHDALRAHLAKFNVTIEQEAFHGGARGMGY ECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHEEEEEHHCCCCCCCCCCE SFYFRDPFGNKIELKGPAEYPDGRAENA EEEEECCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure TLTTPPFSLVGIDHVVFIVDDMTRALDFYRNVLGCTDGYSYPALGMEQVWCGNALIVLW CCCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCEEEEEE DVTHPGGTKAAPPVAGGRNVDHICIATGPLNHDALRAHLAKFNVTIEQEAFHGGARGMGY ECCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHEEEEEHHCCCCCCCCCCE SFYFRDPFGNKIELKGPAEYPDGRAENA EEEEECCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA