Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159184754

Identifier: 159184754

GI number: 159184754

Start: 1418967

End: 1419422

Strand: Reverse

Name: 159184754

Synonym: Atu1422

Alternate gene names: NA

Gene position: 1419422-1418967 (Counterclockwise)

Preceding gene: 15888762

Following gene: 15888748

Centisome position: 49.95

GC content: 57.02

Gene sequence:

>456_bases
ATGGACGTCAATATCGACCGGCTGGAGACAGCGCTTGGATTTCTCATCCGCCTGGCGCAGCTCAAGACCTACGATGATTT
CTTCACCGCACTTGGTGAATCCGGCATGCGGCCGGGCGAATTCTCAGTGCTTTTCGTCATCATGCACAATCCCGGCATTC
GCCAGACGGCGCTCGGCCAGCGGCTGATGATCAAGCGCGCCCATATGACCAAGCTGATCCGCGCCTTCGAAGACAGGAAC
CTCGTGACCCGCCGCGTTCCGGATGATGACCGCCGGGCCATCGAGCTGACATTGACGGCTGAAGGCGTGGCGCATGTGCG
CAAGGAAAGCGAATGGTTCTTTTCGCATGAGGCAACGCTCGGCGCAGGCCTGACCAATGCCGAGCACGATCAGTTCATTG
TCCTGCTGCATAAATTTCTAGGTATGAATTTGGGAGGAACAGGCCGTGAATATTGA

Upstream 100 bases:

>100_bases
CGAACGATATGATGACGCCGGTCGCGCTCTTTTTGAGACATGCGGCAAATTTGGCGAAGCATGAAACGGAAACATCATGG
ACCACCTCCCCCGCAAGACG

Downstream 100 bases:

>100_bases
TGAACTTATTGCCATCGATGTGCATACCCATGCGGAGGAGCCCTGCTGTGGCCCGCGCGACGATGGTTACGATGAATTCC
AGGCGGGCATGGCGAAATAT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator MarR; Transcriptional Regulator Protein Marr Family; Transcription Regulator Protein; Transcription Regulator Protein MarR Family

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MDVNIDRLETALGFLIRLAQLKTYDDFFTALGESGMRPGEFSVLFVIMHNPGIRQTALGQRLMIKRAHMTKLIRAFEDRN
LVTRRVPDDDRRAIELTLTAEGVAHVRKESEWFFSHEATLGAGLTNAEHDQFIVLLHKFLGMNLGGTGREY

Sequences:

>Translated_151_residues
MDVNIDRLETALGFLIRLAQLKTYDDFFTALGESGMRPGEFSVLFVIMHNPGIRQTALGQRLMIKRAHMTKLIRAFEDRN
LVTRRVPDDDRRAIELTLTAEGVAHVRKESEWFFSHEATLGAGLTNAEHDQFIVLLHKFLGMNLGGTGREY
>Mature_151_residues
MDVNIDRLETALGFLIRLAQLKTYDDFFTALGESGMRPGEFSVLFVIMHNPGIRQTALGQRLMIKRAHMTKLIRAFEDRN
LVTRRVPDDDRRAIELTLTAEGVAHVRKESEWFFSHEATLGAGLTNAEHDQFIVLLHKFLGMNLGGTGREY

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17174; Mature: 17174

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVNIDRLETALGFLIRLAQLKTYDDFFTALGESGMRPGEFSVLFVIMHNPGIRQTALGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHH
RLMIKRAHMTKLIRAFEDRNLVTRRVPDDDRRAIELTLTAEGVAHVRKESEWFFSHEATL
HHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEECCHHHHHHHCCCHHEECCCHH
GAGLTNAEHDQFIVLLHKFLGMNLGGTGREY
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDVNIDRLETALGFLIRLAQLKTYDDFFTALGESGMRPGEFSVLFVIMHNPGIRQTALGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHH
RLMIKRAHMTKLIRAFEDRNLVTRRVPDDDRRAIELTLTAEGVAHVRKESEWFFSHEATL
HHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEECCHHHHHHHCCCHHEECCCHH
GAGLTNAEHDQFIVLLHKFLGMNLGGTGREY
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA