Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184754
Identifier: 159184754
GI number: 159184754
Start: 1418967
End: 1419422
Strand: Reverse
Name: 159184754
Synonym: Atu1422
Alternate gene names: NA
Gene position: 1419422-1418967 (Counterclockwise)
Preceding gene: 15888762
Following gene: 15888748
Centisome position: 49.95
GC content: 57.02
Gene sequence:
>456_bases ATGGACGTCAATATCGACCGGCTGGAGACAGCGCTTGGATTTCTCATCCGCCTGGCGCAGCTCAAGACCTACGATGATTT CTTCACCGCACTTGGTGAATCCGGCATGCGGCCGGGCGAATTCTCAGTGCTTTTCGTCATCATGCACAATCCCGGCATTC GCCAGACGGCGCTCGGCCAGCGGCTGATGATCAAGCGCGCCCATATGACCAAGCTGATCCGCGCCTTCGAAGACAGGAAC CTCGTGACCCGCCGCGTTCCGGATGATGACCGCCGGGCCATCGAGCTGACATTGACGGCTGAAGGCGTGGCGCATGTGCG CAAGGAAAGCGAATGGTTCTTTTCGCATGAGGCAACGCTCGGCGCAGGCCTGACCAATGCCGAGCACGATCAGTTCATTG TCCTGCTGCATAAATTTCTAGGTATGAATTTGGGAGGAACAGGCCGTGAATATTGA
Upstream 100 bases:
>100_bases CGAACGATATGATGACGCCGGTCGCGCTCTTTTTGAGACATGCGGCAAATTTGGCGAAGCATGAAACGGAAACATCATGG ACCACCTCCCCCGCAAGACG
Downstream 100 bases:
>100_bases TGAACTTATTGCCATCGATGTGCATACCCATGCGGAGGAGCCCTGCTGTGGCCCGCGCGACGATGGTTACGATGAATTCC AGGCGGGCATGGCGAAATAT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator MarR; Transcriptional Regulator Protein Marr Family; Transcription Regulator Protein; Transcription Regulator Protein MarR Family
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MDVNIDRLETALGFLIRLAQLKTYDDFFTALGESGMRPGEFSVLFVIMHNPGIRQTALGQRLMIKRAHMTKLIRAFEDRN LVTRRVPDDDRRAIELTLTAEGVAHVRKESEWFFSHEATLGAGLTNAEHDQFIVLLHKFLGMNLGGTGREY
Sequences:
>Translated_151_residues MDVNIDRLETALGFLIRLAQLKTYDDFFTALGESGMRPGEFSVLFVIMHNPGIRQTALGQRLMIKRAHMTKLIRAFEDRN LVTRRVPDDDRRAIELTLTAEGVAHVRKESEWFFSHEATLGAGLTNAEHDQFIVLLHKFLGMNLGGTGREY >Mature_151_residues MDVNIDRLETALGFLIRLAQLKTYDDFFTALGESGMRPGEFSVLFVIMHNPGIRQTALGQRLMIKRAHMTKLIRAFEDRN LVTRRVPDDDRRAIELTLTAEGVAHVRKESEWFFSHEATLGAGLTNAEHDQFIVLLHKFLGMNLGGTGREY
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17174; Mature: 17174
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVNIDRLETALGFLIRLAQLKTYDDFFTALGESGMRPGEFSVLFVIMHNPGIRQTALGQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHH RLMIKRAHMTKLIRAFEDRNLVTRRVPDDDRRAIELTLTAEGVAHVRKESEWFFSHEATL HHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEECCHHHHHHHCCCHHEECCCHH GAGLTNAEHDQFIVLLHKFLGMNLGGTGREY CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDVNIDRLETALGFLIRLAQLKTYDDFFTALGESGMRPGEFSVLFVIMHNPGIRQTALGQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHH RLMIKRAHMTKLIRAFEDRNLVTRRVPDDDRRAIELTLTAEGVAHVRKESEWFFSHEATL HHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEECCHHHHHHHCCCHHEECCCHH GAGLTNAEHDQFIVLLHKFLGMNLGGTGREY CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA