Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184741
Identifier: 159184741
GI number: 159184741
Start: 1379309
End: 1380112
Strand: Direct
Name: 159184741
Synonym: Atu1385
Alternate gene names: NA
Gene position: 1379309-1380112 (Clockwise)
Preceding gene: 15888710
Following gene: 15888712
Centisome position: 48.54
GC content: 62.31
Gene sequence:
>804_bases ATGGGCGAGAACCCCTTCATCGTGCGCTTGCGCGATGATTCCCGTTACGACTGGAGCGGTTTTGACAATGCCGTCATCAG CGTCGGCGATGTCGCAGGGCTTGGCCGTCTCCTGCGTGAAAATCAGGTAGACCGTGTCGTATTGTCCGGCGCCGTTGCGC GGCGGCCGGAATGGCGGGAAATCCGCCCCACCGCCGGCATCCTGATTAAGCTGCCCTCCATCGTCAAAACGCTGCTGTCA GGTGGCGATGATGCGGTTCTGCAGATGGTAATCAAGATCATCAGCACGCTCGGCGCAAAAGTCATCGGCGCGCATGAGAT TGCGCCCGGCTTGCTGGCAACCACGGGGCCTCTCGGTGGGCAGAAGCCTGCCGAAGAGGATCTGAAGGATATTCGCGGGG CGGCTGAGGCGGCACTTGCGCTCGGCAAGCTCGATGTCGGGCAGGGGGCAGTCTCCGTTGGTGGCCGCATCGTGGCGCTG GAAGGTATAGAGGGTACGGATGCCATGCTGGCGCGTGTCGCCGCTCTGCGTGCCGAAGGGCGCATATCGCCCCGCCGTAA AGGCGTGCTGGTCAAGCTCTGCAAGCCCCAGCAGGATATACGTGCCGATCTGCCGACCATCGGCATCGAAACCGTAGAAA ATGCGAAAAAAGCCGGACTGGCGGGCATCGCCGTCGAAGCCGGGCGGGCGCTGGTGCTCGATCGTGAGGCGATGTTGAAA GCCGCCGATGAGGCGGGCATATTCGTCTGCGGCATCGATACATCACTGGGTGGCGACATGGTGGGCGGAGACATGATCGG ATGA
Upstream 100 bases:
>100_bases GCCCAACCGGGGCAAGTGAGCCGTGACAGGCGGCGGGCGTCTCGCCATCGTGGCCGGCAGCGGCCAGCTGCCGCTTTATG TGGCGGCGGCGGCCCGGGAG
Downstream 100 bases:
>100_bases CGGCGGCATTAAAAGTGGCGGTAATCGCCGGGGAAGTATCCGGCGATCTCTTGGGCGCGGATCTAATCCGATCGCTCAAA GTCCGATATGCGGGTTCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MGENPFIVRLRDDSRYDWSGFDNAVISVGDVAGLGRLLRENQVDRVVLSGAVARRPEWREIRPTAGILIKLPSIVKTLLS GGDDAVLQMVIKIISTLGAKVIGAHEIAPGLLATTGPLGGQKPAEEDLKDIRGAAEAALALGKLDVGQGAVSVGGRIVAL EGIEGTDAMLARVAALRAEGRISPRRKGVLVKLCKPQQDIRADLPTIGIETVENAKKAGLAGIAVEAGRALVLDREAMLK AADEAGIFVCGIDTSLGGDMVGGDMIG
Sequences:
>Translated_267_residues MGENPFIVRLRDDSRYDWSGFDNAVISVGDVAGLGRLLRENQVDRVVLSGAVARRPEWREIRPTAGILIKLPSIVKTLLS GGDDAVLQMVIKIISTLGAKVIGAHEIAPGLLATTGPLGGQKPAEEDLKDIRGAAEAALALGKLDVGQGAVSVGGRIVAL EGIEGTDAMLARVAALRAEGRISPRRKGVLVKLCKPQQDIRADLPTIGIETVENAKKAGLAGIAVEAGRALVLDREAMLK AADEAGIFVCGIDTSLGGDMVGGDMIG >Mature_266_residues GENPFIVRLRDDSRYDWSGFDNAVISVGDVAGLGRLLRENQVDRVVLSGAVARRPEWREIRPTAGILIKLPSIVKTLLSG GDDAVLQMVIKIISTLGAKVIGAHEIAPGLLATTGPLGGQKPAEEDLKDIRGAAEAALALGKLDVGQGAVSVGGRIVALE GIEGTDAMLARVAALRAEGRISPRRKGVLVKLCKPQQDIRADLPTIGIETVENAKKAGLAGIAVEAGRALVLDREAMLKA ADEAGIFVCGIDTSLGGDMVGGDMIG
Specific function: Unknown
COG id: COG3494
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27767; Mature: 27635
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGENPFIVRLRDDSRYDWSGFDNAVISVGDVAGLGRLLRENQVDRVVLSGAVARRPEWRE CCCCCEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC IRPTAGILIKLPSIVKTLLSGGDDAVLQMVIKIISTLGAKVIGAHEIAPGLLATTGPLGG CCCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHCHHHHCCCHHEECCCCCC QKPAEEDLKDIRGAAEAALALGKLDVGQGAVSVGGRIVALEGIEGTDAMLARVAALRAEG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHCC RISPRRKGVLVKLCKPQQDIRADLPTIGIETVENAKKAGLAGIAVEAGRALVLDREAMLK CCCCCCCCEEEEECCCHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEEHHHHHH AADEAGIFVCGIDTSLGGDMVGGDMIG HHCCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure GENPFIVRLRDDSRYDWSGFDNAVISVGDVAGLGRLLRENQVDRVVLSGAVARRPEWRE CCCCEEEEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC IRPTAGILIKLPSIVKTLLSGGDDAVLQMVIKIISTLGAKVIGAHEIAPGLLATTGPLGG CCCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHCHHHHCCCHHEECCCCCC QKPAEEDLKDIRGAAEAALALGKLDVGQGAVSVGGRIVALEGIEGTDAMLARVAALRAEG CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHCC RISPRRKGVLVKLCKPQQDIRADLPTIGIETVENAKKAGLAGIAVEAGRALVLDREAMLK CCCCCCCCEEEEECCCHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEEHHHHHH AADEAGIFVCGIDTSLGGDMVGGDMIG HHCCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA