Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159184714

Identifier: 159184714

GI number: 159184714

Start: 1315775

End: 1316212

Strand: Direct

Name: 159184714

Synonym: Atu1328

Alternate gene names: NA

Gene position: 1315775-1316212 (Clockwise)

Preceding gene: 15888652

Following gene: 15888659

Centisome position: 46.3

GC content: 58.22

Gene sequence:

>438_bases
ATGAGGAAAATCACGCGGGATCGTTCTTTGCGTGCGCTGACAGTCTCGCTGTTTGCGGCGGTCTCTGCTGTCCTCATCGT
ATCACCCGTCGCCGCCGCCCGTCTGGAAAACCGCGTCGCGGTGTTTTCCGGCATCGACAAGATCACCGGCCGCATCACCT
CCTTCGATGTCTATATCGACGAGACGGTGCAGTTTGGCGCGCTTCAGGTGACGCCGAAGGTCTGTTATTCCCGCGACCAG
ACGGAAACGCAAAAGATCGACGCCTTTGTCGAAGTCGACGAAATCACCCTCGATCGCAAGATCCGCCGTATTTTCACCGG
CTGGATGTTTGCCGATAGCCCCGGCCTCAACGCCGTGGAGCACCCGATCTATGACGTGTGGCTGACGGGTTGCAAGCAGG
ACTCCGAGGTTCCAGCTCCCTCAACGGCAAGCAAATAA

Upstream 100 bases:

>100_bases
CCGCGCTTGTATCCGGCCTCACCGGTTTTTGCCACATTCCGCCCTTAGGCGTTGATCCGGTCGGCGTCTCGACACAGGCA
AATATTTGGAGACATATCGT

Downstream 100 bases:

>100_bases
CCTAACGTAAAGACTAGAATTGCAGGCTCGGCCGGTTGACGGCGAGATCGAGCATTCTTGCATAGTCCAGCTTGGGCACG
TCTATCGCGCCGAACGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptide; Signal Peptide Protein

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MRKITRDRSLRALTVSLFAAVSAVLIVSPVAAARLENRVAVFSGIDKITGRITSFDVYIDETVQFGALQVTPKVCYSRDQ
TETQKIDAFVEVDEITLDRKIRRIFTGWMFADSPGLNAVEHPIYDVWLTGCKQDSEVPAPSTASK

Sequences:

>Translated_145_residues
MRKITRDRSLRALTVSLFAAVSAVLIVSPVAAARLENRVAVFSGIDKITGRITSFDVYIDETVQFGALQVTPKVCYSRDQ
TETQKIDAFVEVDEITLDRKIRRIFTGWMFADSPGLNAVEHPIYDVWLTGCKQDSEVPAPSTASK
>Mature_145_residues
MRKITRDRSLRALTVSLFAAVSAVLIVSPVAAARLENRVAVFSGIDKITGRITSFDVYIDETVQFGALQVTPKVCYSRDQ
TETQKIDAFVEVDEITLDRKIRRIFTGWMFADSPGLNAVEHPIYDVWLTGCKQDSEVPAPSTASK

Specific function: Unknown

COG id: COG4765

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16111; Mature: 16111

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKITRDRSLRALTVSLFAAVSAVLIVSPVAAARLENRVAVFSGIDKITGRITSFDVYID
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHCCEEEEEEEEE
ETVQFGALQVTPKVCYSRDQTETQKIDAFVEVDEITLDRKIRRIFTGWMFADSPGLNAVE
CCCCCCEEEECHHHHCCCCCCHHHHHHHHEEHHHHHHHHHHHHHHHHHHEECCCCCCHHH
HPIYDVWLTGCKQDSEVPAPSTASK
CCHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKITRDRSLRALTVSLFAAVSAVLIVSPVAAARLENRVAVFSGIDKITGRITSFDVYID
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHCCEEEEEEEEE
ETVQFGALQVTPKVCYSRDQTETQKIDAFVEVDEITLDRKIRRIFTGWMFADSPGLNAVE
CCCCCCEEEECHHHHCCCCCCHHHHHHHHEEHHHHHHHHHHHHHHHHHHEECCCCCCHHH
HPIYDVWLTGCKQDSEVPAPSTASK
CCHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA