Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184688
Identifier: 159184688
GI number: 159184688
Start: 1252207
End: 1254405
Strand: Direct
Name: 159184688
Synonym: Atu1263
Alternate gene names: NA
Gene position: 1252207-1254405 (Clockwise)
Preceding gene: 15888591
Following gene: 159184689
Centisome position: 44.07
GC content: 60.3
Gene sequence:
>2199_bases ATGGCGTTCCGATTTTCTCATGTGGCTTTGACCGCGGCATTGCTCACATCCGCTGCCTTTCCGGCCGCTGCCGAACCGGT TTTCAACCGCATCGCGTCTTTCCCGGTAGCGAAGAACCTGCCCGCGGACCAGGACGCCAAGTCCGTCACCTCGGCTGAAA TCGTCACCGCCAGTGAAGATGGCAAGACGCTGATCTATTCGGACAGCCCGCTTGGCGGCATCGGTTTCATCGACATCACC GACGCAAAAGCCCCGAAGGCCGGCGGCGCATTGCTGCTGCAGGGCGAGCCGACCTCGGTTGCCGTTGCCGGTGCGAAGGT TCTGGCCGGCGTCAACACGTCGGAAAACCGTGCCAAGCCCTCGGGTAAGCTGGTAACGGTCGATATCGCCACCAAGAAGA TCGAAGCGAGCTGTGATCTCGGCGGCCAGCCCGATTCCGTTGCCGTTTCTCCAGACAAGACCTTTGTCGCCATCGCGATC GAAAACGAGCGCGATGAAGAAGTGAATGAAGGCGCACTGCCGCAGATGCCGGCCGGTTATCTGGTAACGGTTGGCCTGAA AGACGGCGCGGCCGATTGCGCGACGCTGAAGAAGATCGACGTCACCGGTCTTTCTGAAATTTCCCCTGAGGATCCAGAGC CGGAATTCGTCTCGATCAACGCCAATGGCGAGATCGCGCTCACGATGCAGGAGAACAACCATATCGTCATTATCGACGGC AAGACCGGCACGGTGAAGACGCATTTCTCCGCCGGCACCGTCAATCTGGAAGGCATCGACACCAAGACCGATGGCCAGCT GAAGTTCACCGACAAGCAGGAAGGCCGCAAGCGCGAGCCGGATGCCGTGAAGTGGCTGGACAATGACCGTATCGTCATCG CCAATGAGGGCGACTGGCAGGGCGGATCGCGTGGCTTCACCATTTTCGACAAGACCGGTAAGCTTCTTTATGAAGCCGGT GCTTCGCTCGAGCATGCGGTTGCGGCCATCGGCCACTATCCGGAAAAGCGCTCCAAGGCCAAGGGCATCGAGCCGGAAGG TCTGGAGGCGGCAACCTTCGATGGCCAGAAGTACTTCTTCGTTCTTGCCGAGCGCGCCTCGGTCGTTGCCGTTTACAAGG ATACCGGCGCAGAACCGCAGCTGACGCAGCTTCTGCCTTCGGGAATTTCGCCGGAAGGTGCTGTTGCCATTCCCTCGCGC AACCTTCTCGTCACGGCTAACGAGGCCGATCTGGCCGAGGGTGGCGGTGCTCGTTCGCACGTCATGCTCTATGAACGTGC GGAAGGCCAAGCGGCCTATCCGCAGCTCGTCTCCGCCACCGTCGATGGTGCGCCGATCGGCTGGGGTGCTCTTTCGGGTC TGGTTAGCGATGCCGAAAAGCCAGGCATTCTCTACGCCGTGTCCGACTCGGTCTATGGCAACCAGCCGTCGATCTATACC ATCGACGCCACGAAGAAGCCCGCCGCCATCACCAGCGTTCTGCGTGTGAAGCGTGACGGCATCGCGGCCCAGAAACTCGA TATCGAAGGCATTACCCTCGATGGCAAGGGCGGCTTCTGGCTGGCCTCTGAGGGCGACAGCGCCAAGCTCGTCCCGCACG CGCTCTACAACGTCAACGCCAAGGGTGAAATCAAGGCTGAGATCGCGCTGCCTAAGGAACTGCTTGCCGGTGATACCCGC TTCGGTTTCGAAGGCGTGACCATGGTCGGCAAGGGCGATGACGCCACGCTGTGGATGGCCGTGCAGCGCGAATGGGGCAC GGATGAGAAGGGCTTCGTCAAGCTCGTCTCCTATAACCCGAAGTCCAAGGAGTGGGGCGCCGTGCGTTACCCGCTCGACA AGACCGAGGCCGGCTGGGTCGGCCTTTCTGAAATCACCGCGCAGGGCGATAATGTCTATATCGTCGAACGCGACAACCAG ATCGGCGACAAGGCCAAGATCAAGAAGCTCTACCGCGTCGCGATCGCCGACCTGAAGCCGGGCAAGATCGGTGGCGAGCT GCCGCTGGTGGCCAAGCAGGAAGCGCATGATTTCCTGCCCGATCTCAAGGCGCAGACCAACGGTTACGTCGTCGACAAGC TTGAAGGCTTCACCTTCGACAAGGCGGGAACAGCGTATGCCGTGACCGACAATGACGGTGTGGACGATTCTTCTGGCGAG ACGCTGTTCTTCACCGTCAATCTGAAAGCCATCAACTGA
Upstream 100 bases:
>100_bases CATGGCCGGGCTTTTTGATTCTCCGCCATAAAATGTCATGCCACTGTCACGTCTTTGACGCAGAAGCCATGGGGTGTTTC TGGATCCAAGGGGGATTAAA
Downstream 100 bases:
>100_bases TCGTGCCGAGTGGCGTTACAAATGAGAAAAGCCGGGCATAGCCCGGCTTTTTTGTATCGCCAAGAGACCCATGGGCGGTA TCGCCAATCTTGCACGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 732; Mature: 731
Protein sequence:
>732_residues MAFRFSHVALTAALLTSAAFPAAAEPVFNRIASFPVAKNLPADQDAKSVTSAEIVTASEDGKTLIYSDSPLGGIGFIDIT DAKAPKAGGALLLQGEPTSVAVAGAKVLAGVNTSENRAKPSGKLVTVDIATKKIEASCDLGGQPDSVAVSPDKTFVAIAI ENERDEEVNEGALPQMPAGYLVTVGLKDGAADCATLKKIDVTGLSEISPEDPEPEFVSINANGEIALTMQENNHIVIIDG KTGTVKTHFSAGTVNLEGIDTKTDGQLKFTDKQEGRKREPDAVKWLDNDRIVIANEGDWQGGSRGFTIFDKTGKLLYEAG ASLEHAVAAIGHYPEKRSKAKGIEPEGLEAATFDGQKYFFVLAERASVVAVYKDTGAEPQLTQLLPSGISPEGAVAIPSR NLLVTANEADLAEGGGARSHVMLYERAEGQAAYPQLVSATVDGAPIGWGALSGLVSDAEKPGILYAVSDSVYGNQPSIYT IDATKKPAAITSVLRVKRDGIAAQKLDIEGITLDGKGGFWLASEGDSAKLVPHALYNVNAKGEIKAEIALPKELLAGDTR FGFEGVTMVGKGDDATLWMAVQREWGTDEKGFVKLVSYNPKSKEWGAVRYPLDKTEAGWVGLSEITAQGDNVYIVERDNQ IGDKAKIKKLYRVAIADLKPGKIGGELPLVAKQEAHDFLPDLKAQTNGYVVDKLEGFTFDKAGTAYAVTDNDGVDDSSGE TLFFTVNLKAIN
Sequences:
>Translated_732_residues MAFRFSHVALTAALLTSAAFPAAAEPVFNRIASFPVAKNLPADQDAKSVTSAEIVTASEDGKTLIYSDSPLGGIGFIDIT DAKAPKAGGALLLQGEPTSVAVAGAKVLAGVNTSENRAKPSGKLVTVDIATKKIEASCDLGGQPDSVAVSPDKTFVAIAI ENERDEEVNEGALPQMPAGYLVTVGLKDGAADCATLKKIDVTGLSEISPEDPEPEFVSINANGEIALTMQENNHIVIIDG KTGTVKTHFSAGTVNLEGIDTKTDGQLKFTDKQEGRKREPDAVKWLDNDRIVIANEGDWQGGSRGFTIFDKTGKLLYEAG ASLEHAVAAIGHYPEKRSKAKGIEPEGLEAATFDGQKYFFVLAERASVVAVYKDTGAEPQLTQLLPSGISPEGAVAIPSR NLLVTANEADLAEGGGARSHVMLYERAEGQAAYPQLVSATVDGAPIGWGALSGLVSDAEKPGILYAVSDSVYGNQPSIYT IDATKKPAAITSVLRVKRDGIAAQKLDIEGITLDGKGGFWLASEGDSAKLVPHALYNVNAKGEIKAEIALPKELLAGDTR FGFEGVTMVGKGDDATLWMAVQREWGTDEKGFVKLVSYNPKSKEWGAVRYPLDKTEAGWVGLSEITAQGDNVYIVERDNQ IGDKAKIKKLYRVAIADLKPGKIGGELPLVAKQEAHDFLPDLKAQTNGYVVDKLEGFTFDKAGTAYAVTDNDGVDDSSGE TLFFTVNLKAIN >Mature_731_residues AFRFSHVALTAALLTSAAFPAAAEPVFNRIASFPVAKNLPADQDAKSVTSAEIVTASEDGKTLIYSDSPLGGIGFIDITD AKAPKAGGALLLQGEPTSVAVAGAKVLAGVNTSENRAKPSGKLVTVDIATKKIEASCDLGGQPDSVAVSPDKTFVAIAIE NERDEEVNEGALPQMPAGYLVTVGLKDGAADCATLKKIDVTGLSEISPEDPEPEFVSINANGEIALTMQENNHIVIIDGK TGTVKTHFSAGTVNLEGIDTKTDGQLKFTDKQEGRKREPDAVKWLDNDRIVIANEGDWQGGSRGFTIFDKTGKLLYEAGA SLEHAVAAIGHYPEKRSKAKGIEPEGLEAATFDGQKYFFVLAERASVVAVYKDTGAEPQLTQLLPSGISPEGAVAIPSRN LLVTANEADLAEGGGARSHVMLYERAEGQAAYPQLVSATVDGAPIGWGALSGLVSDAEKPGILYAVSDSVYGNQPSIYTI DATKKPAAITSVLRVKRDGIAAQKLDIEGITLDGKGGFWLASEGDSAKLVPHALYNVNAKGEIKAEIALPKELLAGDTRF GFEGVTMVGKGDDATLWMAVQREWGTDEKGFVKLVSYNPKSKEWGAVRYPLDKTEAGWVGLSEITAQGDNVYIVERDNQI GDKAKIKKLYRVAIADLKPGKIGGELPLVAKQEAHDFLPDLKAQTNGYVVDKLEGFTFDKAGTAYAVTDNDGVDDSSGET LFFTVNLKAIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77402; Mature: 77271
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFRFSHVALTAALLTSAAFPAAAEPVFNRIASFPVAKNLPADQDAKSVTSAEIVTASED CCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEEECCC GKTLIYSDSPLGGIGFIDITDAKAPKAGGALLLQGEPTSVAVAGAKVLAGVNTSENRAKP CCEEEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEECEEEEEECCCCCCCCCC SGKLVTVDIATKKIEASCDLGGQPDSVAVSPDKTFVAIAIENERDEEVNEGALPQMPAGY CCCEEEEEEEEEEEEECCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCE LVTVGLKDGAADCATLKKIDVTGLSEISPEDPEPEFVSINANGEIALTMQENNHIVIIDG EEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCEEEEEEC KTGTVKTHFSAGTVNLEGIDTKTDGQLKFTDKQEGRKREPDAVKWLDNDRIVIANEGDWQ CCCEEEEEECCCEEEEECCCCCCCCEEEECCHHCCCCCCCCCEEEECCCEEEEEECCCCC GGSRGFTIFDKTGKLLYEAGASLEHAVAAIGHYPEKRSKAKGIEPEGLEAATFDGQKYFF CCCCCEEEEECCCCEEECCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCEEEE VLAERASVVAVYKDTGAEPQLTQLLPSGISPEGAVAIPSRNLLVTANEADLAEGGGARSH EEECCCEEEEEEECCCCCCHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCEE VMLYERAEGQAAYPQLVSATVDGAPIGWGALSGLVSDAEKPGILYAVSDSVYGNQPSIYT EEEEEECCCCCCCCHHHEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEE IDATKKPAAITSVLRVKRDGIAAQKLDIEGITLDGKGGFWLASEGDSAKLVPHALYNVNA EECCCCCHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCEEEECCCCCCEECEEEEEECCC KGEIKAEIALPKELLAGDTRFGFEGVTMVGKGDDATLWMAVQREWGTDEKGFVKLVSYNP CCEEEEEEECCHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEECC KSKEWGAVRYPLDKTEAGWVGLSEITAQGDNVYIVERDNQIGDKAKIKKLYRVAIADLKP CCCCCCEEECCCCCCCCCEEEHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCC GKIGGELPLVAKQEAHDFLPDLKAQTNGYVVDKLEGFTFDKAGTAYAVTDNDGVDDSSGE CCCCCCCCEEECHHHHHHCCCCCCCCCCEEEEECCCEEECCCCCEEEEECCCCCCCCCCC TLFFTVNLKAIN EEEEEEEEEEEC >Mature Secondary Structure AFRFSHVALTAALLTSAAFPAAAEPVFNRIASFPVAKNLPADQDAKSVTSAEIVTASED CEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCEEEEEECCC GKTLIYSDSPLGGIGFIDITDAKAPKAGGALLLQGEPTSVAVAGAKVLAGVNTSENRAKP CCEEEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCEEEEECEEEEEECCCCCCCCCC SGKLVTVDIATKKIEASCDLGGQPDSVAVSPDKTFVAIAIENERDEEVNEGALPQMPAGY CCCEEEEEEEEEEEEECCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCE LVTVGLKDGAADCATLKKIDVTGLSEISPEDPEPEFVSINANGEIALTMQENNHIVIIDG EEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCEEEEEEC KTGTVKTHFSAGTVNLEGIDTKTDGQLKFTDKQEGRKREPDAVKWLDNDRIVIANEGDWQ CCCEEEEEECCCEEEEECCCCCCCCEEEECCHHCCCCCCCCCEEEECCCEEEEEECCCCC GGSRGFTIFDKTGKLLYEAGASLEHAVAAIGHYPEKRSKAKGIEPEGLEAATFDGQKYFF CCCCCEEEEECCCCEEECCCCCHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCEEEE VLAERASVVAVYKDTGAEPQLTQLLPSGISPEGAVAIPSRNLLVTANEADLAEGGGARSH EEECCCEEEEEEECCCCCCHHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCEE VMLYERAEGQAAYPQLVSATVDGAPIGWGALSGLVSDAEKPGILYAVSDSVYGNQPSIYT EEEEEECCCCCCCCHHHEEECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEE IDATKKPAAITSVLRVKRDGIAAQKLDIEGITLDGKGGFWLASEGDSAKLVPHALYNVNA EECCCCCHHHHHHHHHHHCCCEEEEEEEEEEEEECCCCEEEECCCCCCEECEEEEEECCC KGEIKAEIALPKELLAGDTRFGFEGVTMVGKGDDATLWMAVQREWGTDEKGFVKLVSYNP CCEEEEEEECCHHHHCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCEEEEEEECC KSKEWGAVRYPLDKTEAGWVGLSEITAQGDNVYIVERDNQIGDKAKIKKLYRVAIADLKP CCCCCCEEECCCCCCCCCEEEHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCC GKIGGELPLVAKQEAHDFLPDLKAQTNGYVVDKLEGFTFDKAGTAYAVTDNDGVDDSSGE CCCCCCCCEEECHHHHHHCCCCCCCCCCEEEEECCCEEECCCCCEEEEECCCCCCCCCCC TLFFTVNLKAIN EEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA