Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159184683

Identifier: 159184683

GI number: 159184683

Start: 1237221

End: 1238057

Strand: Reverse

Name: 159184683

Synonym: Atu1248

Alternate gene names: NA

Gene position: 1238057-1237221 (Counterclockwise)

Preceding gene: 17935152

Following gene: 159184682

Centisome position: 43.57

GC content: 62.01

Gene sequence:

>837_bases
GTGACATTTGACATTCTTCTTCTGGTGCTCCTGGGCGCGGTGCTGCATGCCGGATGGAATGCGCTGGTCAAATCCGGATC
CGACAAATCGCTGGACGCCTCGCTGATTGCGGCAGGGGCTGCGGCCTGCTCCTTGCCCTTTCTGCCTTTCCTGCCCTTTC
CCGCGCCGGTGGCCATTCCTTTTCTGATTGCCTCGGCGGTTCTGCAATTCGCCTATTTCCGCCTTGTCGCCGCCGCCTAT
ACGATCGGCGATATCGGCCTCGTTTATCCCGTCATGCGCGGTGTGGCGCCTTTGATCGTTGCCGCAACGAGCAGCCTGTT
CCTCAGCGAGGTGTTAAGCCCGCTCGCACTCGCCGGCATCGCCGTCATTTCCGGCGGCATCCTGACGCTGGCTTTCGAAG
CGCGGCGCGGCGGCGGAAAGGCGATCCTGGTCGCTCTTCTCAATGCCTTCGTGATCGCCTCCTACACCTTCGTCGATGGT
GTCGGCGCCCGGCTTTCCGGCAATGCGATCTCCTATACGCTGTGGATGTCGCTTCTGCCGCCGGTGCTGCTGTTCGGTTT
TGCCTTTTACCAGCGTGGCGTCGGCCCGGTCGCGCGGCATGTGCAACGCAACTGGTGGCGCGGCCTGATTGGCGGCGGCG
GCTCCATTCTGTCCTACGGTCTGGCGCTCTATGCCATGACCAAGGCTCCCGTCGCCGTCGTCGCTGCACTTAGGGAAACC
TCCATTCTCTTTGCGCTGGTGATCTCCGTCGTCATCCTGAAGGAACGCGCCAGCATTTGGCGTTATCTCGCCGGCGGTAT
CATTGCAGCGGGTGTTCTGGTGATGCGGCTCGGCTAA

Upstream 100 bases:

>100_bases
ATGGGCAATCGGAAAAGGCTTGTTGCCCGCGGGAAATCGATTCCGGTTTGCAAACCAATGGTATAGGTTGCCCAAATTAG
CCGGCGAGCGAGTCTCTATC

Downstream 100 bases:

>100_bases
AAAGGGTCAACTTAATGGGGTAAAATAATACCCCATATCTAACATACTGTTTTTATTTATTTATTTTTACGGTCAGTAAA
ATCAGTCATATTGACGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Integral Membrane; Inner Membrane Protein; Transporter Dme Family; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Protein; EmrE Membrane Transporter Of Cations And Cationic Drugs; Drug/Metabolite Transporter Superfamily Permease; Drug/Metabolite Exporter Family Protein; Transporter Of DMT Superfamily; Permease Protein; DMT Family Permease

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MTFDILLLVLLGAVLHAGWNALVKSGSDKSLDASLIAAGAAACSLPFLPFLPFPAPVAIPFLIASAVLQFAYFRLVAAAY
TIGDIGLVYPVMRGVAPLIVAATSSLFLSEVLSPLALAGIAVISGGILTLAFEARRGGGKAILVALLNAFVIASYTFVDG
VGARLSGNAISYTLWMSLLPPVLLFGFAFYQRGVGPVARHVQRNWWRGLIGGGGSILSYGLALYAMTKAPVAVVAALRET
SILFALVISVVILKERASIWRYLAGGIIAAGVLVMRLG

Sequences:

>Translated_278_residues
MTFDILLLVLLGAVLHAGWNALVKSGSDKSLDASLIAAGAAACSLPFLPFLPFPAPVAIPFLIASAVLQFAYFRLVAAAY
TIGDIGLVYPVMRGVAPLIVAATSSLFLSEVLSPLALAGIAVISGGILTLAFEARRGGGKAILVALLNAFVIASYTFVDG
VGARLSGNAISYTLWMSLLPPVLLFGFAFYQRGVGPVARHVQRNWWRGLIGGGGSILSYGLALYAMTKAPVAVVAALRET
SILFALVISVVILKERASIWRYLAGGIIAAGVLVMRLG
>Mature_277_residues
TFDILLLVLLGAVLHAGWNALVKSGSDKSLDASLIAAGAAACSLPFLPFLPFPAPVAIPFLIASAVLQFAYFRLVAAAYT
IGDIGLVYPVMRGVAPLIVAATSSLFLSEVLSPLALAGIAVISGGILTLAFEARRGGGKAILVALLNAFVIASYTFVDGV
GARLSGNAISYTLWMSLLPPVLLFGFAFYQRGVGPVARHVQRNWWRGLIGGGGSILSYGLALYAMTKAPVAVVAALRETS
ILFALVISVVILKERASIWRYLAGGIIAAGVLVMRLG

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28989; Mature: 28858

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TFDILLLVLLGAVLHAGWNALVKSGSDKSLDASLIAAGAAACSLPFLPFLPFPAPVAIP
HHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
FLIASAVLQFAYFRLVAAAYTIGDIGLVYPVMRGVAPLIVAATSSLFLSEVLSPLALAGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVISGGILTLAFEARRGGGKAILVALLNAFVIASYTFVDGVGARLSGNAISYTLWMSLLP
HHHHCCHHEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
PVLLFGFAFYQRGVGPVARHVQRNWWRGLIGGGGSILSYGLALYAMTKAPVAVVAALRET
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SILFALVISVVILKERASIWRYLAGGIIAAGVLVMRLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA