Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159184657
Identifier: 159184657
GI number: 159184657
Start: 1181501
End: 1181833
Strand: Direct
Name: 159184657
Synonym: Atu1188
Alternate gene names: NA
Gene position: 1181501-1181833 (Clockwise)
Preceding gene: 159184656
Following gene: 159184658
Centisome position: 41.58
GC content: 54.05
Gene sequence:
>333_bases GTGACCATCAAAGGCGGGTTCCACTTAGTTGATGCACCCCCCATGGAAAGCCCCGGTGATGAACCTTCGGTAGACATGGG CCTCCCGAACATTTCTGGTAGGCAGTTATGGCTTGCTGCTCTCAGCATCGGCGTGAGAAAAGACGCCGTGCTGTCTTCCC TCAATGATATCGAGGATGAAGAGCAAGCTGAAATCCTCCGCATTGAACTCACCGAGCCACCGTTGAACGGCTACGAGCGA CTTAGCCCCGCAGTGGAAACCTTCCGGGTGATGCAGGGTATTCCGATGGAGCAGTTCAATGACCTTTGGCTATGGGCCTC TCAGATCAAATAG
Upstream 100 bases:
>100_bases ATTCGAAGGCGGTGTTGCGACCGACCCCCAAGTCGGTGCCGTCGAAATTACTTGGGAGCAGTATCAGAACGCTATTGCTG GTTTCACGGCTGGTAAAGCT
Downstream 100 bases:
>100_bases CAGGACCAATGGACGACACTCAGAACTTCTATCTGATGTTCGGACGGCTGGAGGGCAAGGTAGACACTTTGCTCTCCCAG CAGGGCGGCATCAACAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MTIKGGFHLVDAPPMESPGDEPSVDMGLPNISGRQLWLAALSIGVRKDAVLSSLNDIEDEEQAEILRIELTEPPLNGYER LSPAVETFRVMQGIPMEQFNDLWLWASQIK
Sequences:
>Translated_110_residues MTIKGGFHLVDAPPMESPGDEPSVDMGLPNISGRQLWLAALSIGVRKDAVLSSLNDIEDEEQAEILRIELTEPPLNGYER LSPAVETFRVMQGIPMEQFNDLWLWASQIK >Mature_109_residues TIKGGFHLVDAPPMESPGDEPSVDMGLPNISGRQLWLAALSIGVRKDAVLSSLNDIEDEEQAEILRIELTEPPLNGYERL SPAVETFRVMQGIPMEQFNDLWLWASQIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12262; Mature: 12131
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKGGFHLVDAPPMESPGDEPSVDMGLPNISGRQLWLAALSIGVRKDAVLSSLNDIEDE CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCC EQAEILRIELTEPPLNGYERLSPAVETFRVMQGIPMEQFNDLWLWASQIK CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCC >Mature Secondary Structure TIKGGFHLVDAPPMESPGDEPSVDMGLPNISGRQLWLAALSIGVRKDAVLSSLNDIEDE CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCC EQAEILRIELTEPPLNGYERLSPAVETFRVMQGIPMEQFNDLWLWASQIK CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA