Click here to switch to the map view.

The map label for this gene is yhiR [H]

Identifier: 159184630

GI number: 159184630

Start: 1123914

End: 1124777

Strand: Reverse

Name: yhiR [H]

Synonym: Atu1135

Alternate gene names: 159184630

Gene position: 1124777-1123914 (Counterclockwise)

Preceding gene: 15888475

Following gene: 159184629

Centisome position: 39.58

GC content: 60.19

Gene sequence:

>864_bases
ATGAACTACCGCCACATCTATCACGCCGGCAATTTCGCGGATGTCCTCAAACATGCCGTTCTCGCCCGCCTCGTGCGTTA
TCTCCAGAACAAGGACAAGGCGTTTCGGGTGCTGGACACCCATGCCGGCATCGGGCTTTACGACCTCTCCTCCGAAGAGG
CACAGAAAACCGGCGAATGGCAGACCGGCATCGGCAAGCTGATGGAAGCCGACCTGCCTGCCCCCATCGCCGAATTGCTG
GAGCCCTACCTTGCCGCCGTCAGGGAGCTTAACCCGGAAGGCGGCATGCAATTCTATCCCGGCTCGCCGAAACTCGCGCG
CATGCTGTTCCGTCCGCAGGACCGGCTTTCGGCCATGGAACTGCATCCGGACGACGCACGTGCCCTGTCGCGTTTGTTCG
AGGGGGATTATCAGGTTCGCGTCACCGAACTGGATGGCTGGCTATCGCTCGGCGCACATCTGCCGCCAAAGGAAAAGCGC
GGCCTCATCCTCGTCGATCCGCCTTTCGAGCTTGAGAACGAATATCAGCGGCTGGCCGATGGTCTGAACAAGGCTTACCG
GCGTTTCTCCACCGGCACCTATTGCCTGTGGTATCCGTTGAAAAAAGGCGCTCCGATCAGGGATTTCCATGAGCGGCTGC
AATCCTTCGATATTCCGAAGATGCTGTGTGCGGAACTATCCGTCAAAAGCGACCGGCTCGAGGGCTTGAGCGGTTCGGGC
CTCATCGTCGTCAACCCGCCCTATACGCTGAAGGACGAACTGCACACGCTGCTGCCCTTCCTGAAAACGGTGATGGCGCA
GGACCGGTACGCATCGCACCGCGCCTTCTGGCTGCGCGGCGAGGAGAAGCCGGAAGAGGATTGA

Upstream 100 bases:

>100_bases
GTATATTGCATCAACGATGCGGCAAAAAGGCCGAAGTGACGTCCATCAAGAATATTCATCCTGACCATTCATCCCGATAA
ACGCCAAGCGAGACACATCC

Downstream 100 bases:

>100_bases
GGTTCTACCGCAACCCTTCCCGTTTCTGCGCCTGCGCAAGCTGTGATCGTTCAAAGAACAGGATCACGAACAGCGCCATG
ATGAAGGGTATGATGAGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MNYRHIYHAGNFADVLKHAVLARLVRYLQNKDKAFRVLDTHAGIGLYDLSSEEAQKTGEWQTGIGKLMEADLPAPIAELL
EPYLAAVRELNPEGGMQFYPGSPKLARMLFRPQDRLSAMELHPDDARALSRLFEGDYQVRVTELDGWLSLGAHLPPKEKR
GLILVDPPFELENEYQRLADGLNKAYRRFSTGTYCLWYPLKKGAPIRDFHERLQSFDIPKMLCAELSVKSDRLEGLSGSG
LIVVNPPYTLKDELHTLLPFLKTVMAQDRYASHRAFWLRGEEKPEED

Sequences:

>Translated_287_residues
MNYRHIYHAGNFADVLKHAVLARLVRYLQNKDKAFRVLDTHAGIGLYDLSSEEAQKTGEWQTGIGKLMEADLPAPIAELL
EPYLAAVRELNPEGGMQFYPGSPKLARMLFRPQDRLSAMELHPDDARALSRLFEGDYQVRVTELDGWLSLGAHLPPKEKR
GLILVDPPFELENEYQRLADGLNKAYRRFSTGTYCLWYPLKKGAPIRDFHERLQSFDIPKMLCAELSVKSDRLEGLSGSG
LIVVNPPYTLKDELHTLLPFLKTVMAQDRYASHRAFWLRGEEKPEED
>Mature_287_residues
MNYRHIYHAGNFADVLKHAVLARLVRYLQNKDKAFRVLDTHAGIGLYDLSSEEAQKTGEWQTGIGKLMEADLPAPIAELL
EPYLAAVRELNPEGGMQFYPGSPKLARMLFRPQDRLSAMELHPDDARALSRLFEGDYQVRVTELDGWLSLGAHLPPKEKR
GLILVDPPFELENEYQRLADGLNKAYRRFSTGTYCLWYPLKKGAPIRDFHERLQSFDIPKMLCAELSVKSDRLEGLSGSG
LIVVNPPYTLKDELHTLLPFLKTVMAQDRYASHRAFWLRGEEKPEED

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=266, Percent_Identity=45.1127819548872, Blast_Score=235, Evalue=3e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32768; Mature: 32768

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYRHIYHAGNFADVLKHAVLARLVRYLQNKDKAFRVLDTHAGIGLYDLSSEEAQKTGEW
CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCEEECCCHHHHHCCCH
QTGIGKLMEADLPAPIAELLEPYLAAVRELNPEGGMQFYPGSPKLARMLFRPQDRLSAME
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHCCHHHHHHHH
LHPDDARALSRLFEGDYQVRVTELDGWLSLGAHLPPKEKRGLILVDPPFELENEYQRLAD
CCCCHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
GLNKAYRRFSTGTYCLWYPLKKGAPIRDFHERLQSFDIPKMLCAELSVKSDRLEGLSGSG
HHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCCCC
LIVVNPPYTLKDELHTLLPFLKTVMAQDRYASHRAFWLRGEEKPEED
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC
>Mature Secondary Structure
MNYRHIYHAGNFADVLKHAVLARLVRYLQNKDKAFRVLDTHAGIGLYDLSSEEAQKTGEW
CCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCEEECCCHHHHHCCCH
QTGIGKLMEADLPAPIAELLEPYLAAVRELNPEGGMQFYPGSPKLARMLFRPQDRLSAME
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCHHHHHHHHCCHHHHHHHH
LHPDDARALSRLFEGDYQVRVTELDGWLSLGAHLPPKEKRGLILVDPPFELENEYQRLAD
CCCCHHHHHHHHHCCCCEEEEEECCCHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
GLNKAYRRFSTGTYCLWYPLKKGAPIRDFHERLQSFDIPKMLCAELSVKSDRLEGLSGSG
HHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCHHHHCCCCCCC
LIVVNPPYTLKDELHTLLPFLKTVMAQDRYASHRAFWLRGEEKPEED
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]