Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184576
Identifier: 159184576
GI number: 159184576
Start: 1004757
End: 1005095
Strand: Reverse
Name: 159184576
Synonym: Atu1009
Alternate gene names: NA
Gene position: 1005095-1004757 (Counterclockwise)
Preceding gene: 159184577
Following gene: 159184575
Centisome position: 35.37
GC content: 59.0
Gene sequence:
>339_bases ATGAAGCGTATAATGACGATTGCCGCCGCCCTTATGATGAGCGGCAACCTTGCCTTTGCTGGCGAGGCAATCGAGGGCAA CTGGAAGACGGCCAGCGGCGAAACCGCCGTGATCGGCCCCTGCGGCGGCGCCTTCTGCGTGACGCTGAAGACCGGCAAAC ATGCCGGAAAACAGATCGGCAAGCTTTCCGGCAAGGGAAACAGCTATTCCGGCGAAATCACCGACCCCGCCAACGACAAG ACCTATAGCGGCTCCGGCACCGTTTCCGGCAATTCGCTGAGCATGAAGGGCTGCGTGCTGAAGATTTTGTGCAAATCGCA GACCTGGACACGGCTGTAA
Upstream 100 bases:
>100_bases AGAGACGGCGCATGGCACGCTAAAGAGGTTTGATCTGCGCAAGCCGCGTCTTCGGCCCATCCGGCTCAGGAAAGCCTGCG CGAATTTCGGGAGGAATTTT
Downstream 100 bases:
>100_bases CCGGGAAGGCGGCGGGCAGGCTTTCAGCCGCCCGCCAGCACGGCGTCATGCGACCTGGACAGAGATCGCGCGTGGAACAC ACAGGCCCGTTGATGTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKRIMTIAAALMMSGNLAFAGEAIEGNWKTASGETAVIGPCGGAFCVTLKTGKHAGKQIGKLSGKGNSYSGEITDPANDK TYSGSGTVSGNSLSMKGCVLKILCKSQTWTRL
Sequences:
>Translated_112_residues MKRIMTIAAALMMSGNLAFAGEAIEGNWKTASGETAVIGPCGGAFCVTLKTGKHAGKQIGKLSGKGNSYSGEITDPANDK TYSGSGTVSGNSLSMKGCVLKILCKSQTWTRL >Mature_112_residues MKRIMTIAAALMMSGNLAFAGEAIEGNWKTASGETAVIGPCGGAFCVTLKTGKHAGKQIGKLSGKGNSYSGEITDPANDK TYSGSGTVSGNSLSMKGCVLKILCKSQTWTRL
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11521; Mature: 11521
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIMTIAAALMMSGNLAFAGEAIEGNWKTASGETAVIGPCGGAFCVTLKTGKHAGKQIG CCHHHHHHHHHHHCCCEEEECCEECCCEEECCCCEEEEECCCCEEEEEEECCCCCHHHHH KLSGKGNSYSGEITDPANDKTYSGSGTVSGNSLSMKGCVLKILCKSQTWTRL CCCCCCCCCCCEECCCCCCCEECCCCEECCCCEECCCEEEEEEECCCCCCCC >Mature Secondary Structure MKRIMTIAAALMMSGNLAFAGEAIEGNWKTASGETAVIGPCGGAFCVTLKTGKHAGKQIG CCHHHHHHHHHHHCCCEEEECCEECCCEEECCCCEEEEECCCCEEEEEEECCCCCHHHHH KLSGKGNSYSGEITDPANDKTYSGSGTVSGNSLSMKGCVLKILCKSQTWTRL CCCCCCCCCCCEECCCCCCCEECCCCEECCCCEECCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA