Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184574
Identifier: 159184574
GI number: 159184574
Start: 1003657
End: 1003908
Strand: Direct
Name: 159184574
Synonym: Atu1007
Alternate gene names: NA
Gene position: 1003657-1003908 (Clockwise)
Preceding gene: 159184570
Following gene: 15888354
Centisome position: 35.32
GC content: 57.14
Gene sequence:
>252_bases TTGGAAAAGCTTGTCGTCATCATCAGGTCCTCACAGCACGACGGGGCAATTGGTGGCCGGCGCCGGGCCGTGCTGGCAGG CAATCGCCGCCCCGGCATTCACCCGCTGAAAGCTGCGGTTGGGATTAACGACGAGCGAGGCGAAGGACATGGCGAAGATC GCCATGAGAAACGCGAAGATTGCCAGCCGGCTGATCAACTTTGTCATGTCCATTCCCCTTTATTGGAGTTGATGGACAGA GTTTTGCCATAG
Upstream 100 bases:
>100_bases GGATGCCGGGCGGGGATCGGCCTTGTAGACCGCAAGTCCGGCCACCGGGCCGAGAAAGATCGAGGCCATCAGCACCAGCC GCAGGGCGGAGAACAGGCCG
Downstream 100 bases:
>100_bases TCGGACTGAACGGACCCTGAGGCCCCGGTTCATATGGTGTTCAGGGATGTTAACAGGTGGTGACATGGCGGCTTGATGCC GCAATGGCGCAGGGCGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MEKLVVIIRSSQHDGAIGGRRRAVLAGNRRPGIHPLKAAVGINDERGEGHGEDRHEKREDCQPADQLCHVHSPLLELMDR VLP
Sequences:
>Translated_83_residues MEKLVVIIRSSQHDGAIGGRRRAVLAGNRRPGIHPLKAAVGINDERGEGHGEDRHEKREDCQPADQLCHVHSPLLELMDR VLP >Mature_83_residues MEKLVVIIRSSQHDGAIGGRRRAVLAGNRRPGIHPLKAAVGINDERGEGHGEDRHEKREDCQPADQLCHVHSPLLELMDR VLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9216; Mature: 9216
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLVVIIRSSQHDGAIGGRRRAVLAGNRRPGIHPLKAAVGINDERGEGHGEDRHEKRED CCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHC CQPADQLCHVHSPLLELMDRVLP CCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKLVVIIRSSQHDGAIGGRRRAVLAGNRRPGIHPLKAAVGINDERGEGHGEDRHEKRED CCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHC CQPADQLCHVHSPLLELMDRVLP CCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA