Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184572
Identifier: 159184572
GI number: 159184572
Start: 1001596
End: 1001826
Strand: Reverse
Name: 159184572
Synonym: Atu1005
Alternate gene names: NA
Gene position: 1001826-1001596 (Counterclockwise)
Preceding gene: 159184573
Following gene: 159184571
Centisome position: 35.26
GC content: 53.25
Gene sequence:
>231_bases ATGCGCACGAATATTGAGCTTGATGACGCCTTGATCGCAGAAGCGATGGAAATCACTGGCCTTCCGACGAAAAAGGCGAC GGTCGAAAAGGCGTTGCGCGATCTCGTAGAAAATCTCGGGCGGCGAAAAGCGTTGCAGGAACTTAGAGGTATCGGCTGGA AGGGCGATTTAGAAGAAGTCCGCGGCAGCTGGAGCGCAGATAGTATAAAGTCGCAAGACGCCGCAGAATGA
Upstream 100 bases:
>100_bases GCTCAGAAGTTTTTACGAGACGGCGTTCCAGTAAAAACAGATTTCGCGGCACCCTGCCTTGGTGTATGATTTCGAAAATC GATACACCAAGGATTTTTCT
Downstream 100 bases:
>100_bases TCGTTGTTGACACGTCTGTCTGGATCGACTGGTTTCAGAATAAACAAACGCCGCAAGTCGCTACACTCAGCGATATCAAC GATCTTTCCGACGTGATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MRTNIELDDALIAEAMEITGLPTKKATVEKALRDLVENLGRRKALQELRGIGWKGDLEEVRGSWSADSIKSQDAAE
Sequences:
>Translated_76_residues MRTNIELDDALIAEAMEITGLPTKKATVEKALRDLVENLGRRKALQELRGIGWKGDLEEVRGSWSADSIKSQDAAE >Mature_76_residues MRTNIELDDALIAEAMEITGLPTKKATVEKALRDLVENLGRRKALQELRGIGWKGDLEEVRGSWSADSIKSQDAAE
Specific function: Unknown
COG id: COG5450
COG function: function code K; Transcription regulator of the Arc/MetJ class
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8410; Mature: 8410
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTNIELDDALIAEAMEITGLPTKKATVEKALRDLVENLGRRKALQELRGIGWKGDLEEV CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RGSWSADSIKSQDAAE CCCCCCCCCCCCCCCC >Mature Secondary Structure MRTNIELDDALIAEAMEITGLPTKKATVEKALRDLVENLGRRKALQELRGIGWKGDLEEV CCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH RGSWSADSIKSQDAAE CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA