BacMap

Definition	Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession	NC_003062
Length	2,841,580

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The map label for this gene is fabG [H]

Identifier: 159184565

GI number: 159184565

Start: 985793

End: 986581

Strand: Reverse

Name: fabG [H]

Synonym: Atu0990

Alternate gene names: 159184565

Gene position: 986581-985793 (Counterclockwise)

Preceding gene: 15888335

Following gene: 159184563

Centisome position: 34.72

GC content: 62.48

Gene sequence:

>789_bases
ATGGATTTCGGCATTTCCGGCAAACGCGCCCTCGTTCTCGCCTCCTCTCGCGGCCTTGGGCTGGGCATTGCCACCGCGCT
GGCGAAAGAGGGCGCAAACGTCCTTCTGGTTGGCCGAAGCGGTGAAAAGCTGGCGGAAAATTGCAAGGCGATCAATGCGC
TCGGCAAGGGCAAGGCCGACTGGGTGTGGGGTGATCTTGCCGATGACAATTTCGTCGAATCCATGGTTCAGGCCGTCGAG
GACAAGCTCGGCGGCATCGATATTCTCGTCAACAATACCGGTGGTCCGACGCCCGGCCTTGCGCAGGAAATGACGGTCGA
CAAGCTCGACACCTTCTTCCAGTCCATGGTGCTGCGGGTCATCACGCTGACCAACGCGCTGCTGCCGCAGATGAAGGAAC
AGGGTTTCGGCCGCATCCTCACCGTCGCCTCGTCAGGCGTGTTCGAACCGATCCCCAATCTCGCCCTTTCCAACACCCTG
CGCGGCGCGCTTGTCGGCTGGAGCAAGACGCTGTCGTCAGAAGTGGCCTCCTTCGGCATCACCTCCAACCTGCTGCTGCC
CGGCCGCATCCATACCGACCGCATCGACGAGCTGGATGGCGCCAATGCCAAGCGTCTCGGCAAGAGCATTGAGGAAGTGC
GTGAGGCCTCCGTCAAGGGCATTCCGGCCGGCCGTCTCGGCACGGTGGAAGAATTCGCCGCCGCCGGCGCTTTCCTCTGC
TCGGTGCCGGCGAGCTATATTACCGGCACGATGCTGCGGGTAGACGGCGGCGCCGCGAAGTCGAATTAA

Upstream 100 bases:

>100_bases
CTTTGTTTTGTCGCATTTCCGGACGGAAAACCGGGGTCCACTTTTCCTGGAAATGCTCTATAAACACCACATACGGCACT
CACAAGACAGGACAAACTCC

Downstream 100 bases:

>100_bases
AGGCTTCCGCCTCAAGGCCGATCAAGGAACCGTTGCGTAGATCACGTAACGGTTTCGCCCCGTATTCTTGGCTTCATAAA
GCGCGGTATCGGCGTGGCGC

Product: NAD/NADP dependent oxidoreductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MDFGISGKRALVLASSRGLGLGIATALAKEGANVLLVGRSGEKLAENCKAINALGKGKADWVWGDLADDNFVESMVQAVE
DKLGGIDILVNNTGGPTPGLAQEMTVDKLDTFFQSMVLRVITLTNALLPQMKEQGFGRILTVASSGVFEPIPNLALSNTL
RGALVGWSKTLSSEVASFGITSNLLLPGRIHTDRIDELDGANAKRLGKSIEEVREASVKGIPAGRLGTVEEFAAAGAFLC
SVPASYITGTMLRVDGGAAKSN

Sequences:

>Translated_262_residues
MDFGISGKRALVLASSRGLGLGIATALAKEGANVLLVGRSGEKLAENCKAINALGKGKADWVWGDLADDNFVESMVQAVE
DKLGGIDILVNNTGGPTPGLAQEMTVDKLDTFFQSMVLRVITLTNALLPQMKEQGFGRILTVASSGVFEPIPNLALSNTL
RGALVGWSKTLSSEVASFGITSNLLLPGRIHTDRIDELDGANAKRLGKSIEEVREASVKGIPAGRLGTVEEFAAAGAFLC
SVPASYITGTMLRVDGGAAKSN
>Mature_262_residues
MDFGISGKRALVLASSRGLGLGIATALAKEGANVLLVGRSGEKLAENCKAINALGKGKADWVWGDLADDNFVESMVQAVE
DKLGGIDILVNNTGGPTPGLAQEMTVDKLDTFFQSMVLRVITLTNALLPQMKEQGFGRILTVASSGVFEPIPNLALSNTL
RGALVGWSKTLSSEVASFGITSNLLLPGRIHTDRIDELDGANAKRLGKSIEEVREASVKGIPAGRLGTVEEFAAAGAFLC
SVPASYITGTMLRVDGGAAKSN

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=257, Percent_Identity=32.6848249027237, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI40254992, Length=251, Percent_Identity=29.8804780876494, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI5031737, Length=262, Percent_Identity=29.0076335877863, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI126723750, Length=265, Percent_Identity=29.4339622641509, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=28.0769230769231, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI4503301, Length=264, Percent_Identity=27.6515151515151, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI226371731, Length=189, Percent_Identity=30.1587301587302, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI126723191, Length=187, Percent_Identity=31.5508021390374, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI33667109, Length=260, Percent_Identity=28.8461538461538, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI32455239, Length=194, Percent_Identity=29.3814432989691, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI5031765, Length=194, Percent_Identity=29.3814432989691, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI7705855, Length=213, Percent_Identity=28.6384976525822, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI4557649, Length=256, Percent_Identity=24.609375, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI20149619, Length=188, Percent_Identity=27.1276595744681, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI66933014, Length=233, Percent_Identity=26.1802575107296, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI1787335, Length=260, Percent_Identity=34.6153846153846, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI87082100, Length=258, Percent_Identity=32.5581395348837, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789378, Length=253, Percent_Identity=28.8537549407115, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1787905, Length=260, Percent_Identity=26.9230769230769, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1788459, Length=255, Percent_Identity=29.0196078431373, Blast_Score=81, Evalue=9e-17,
Organism=Escherichia coli, GI87082160, Length=263, Percent_Identity=27.3764258555133, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI2367365, Length=253, Percent_Identity=31.2252964426877, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1789208, Length=260, Percent_Identity=27.3076923076923, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1790717, Length=257, Percent_Identity=24.124513618677, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI2367175, Length=254, Percent_Identity=29.1338582677165, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786812, Length=263, Percent_Identity=26.615969581749, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=253, Percent_Identity=31.2252964426877, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=29.8850574712644, Blast_Score=94, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=28.9473684210526, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=27.5590551181102, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=30.8270676691729, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17559104, Length=265, Percent_Identity=27.9245283018868, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17551412, Length=266, Percent_Identity=29.6992481203008, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17565030, Length=256, Percent_Identity=29.296875, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17538480, Length=268, Percent_Identity=29.4776119402985, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=28.8973384030418, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=29.6, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=28.8389513108614, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=266, Percent_Identity=27.8195488721804, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=28.6852589641434, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=26.7924528301887, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17531453, Length=262, Percent_Identity=28.6259541984733, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17536025, Length=263, Percent_Identity=26.2357414448669, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=29.2134831460674, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17536651, Length=267, Percent_Identity=25.4681647940075, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI72000259, Length=267, Percent_Identity=27.3408239700375, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17561272, Length=255, Percent_Identity=28.2352941176471, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=264, Percent_Identity=27.6515151515151, Blast_Score=64, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=259, Percent_Identity=27.027027027027, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=236, Percent_Identity=27.9661016949153, Blast_Score=74, Evalue=3e-14,
Organism=Drosophila melanogaster, GI23397609, Length=257, Percent_Identity=31.5175097276265, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=32, Blast_Score=98, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=31.6, Blast_Score=98, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24644339, Length=257, Percent_Identity=28.0155642023346, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI21355319, Length=260, Percent_Identity=30.3846153846154, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24584744, Length=215, Percent_Identity=30.2325581395349, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI28574402, Length=215, Percent_Identity=30.2325581395349, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24584748, Length=190, Percent_Identity=31.5789473684211, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI161076933, Length=190, Percent_Identity=31.5789473684211, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24639444, Length=261, Percent_Identity=26.8199233716475, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21358495, Length=231, Percent_Identity=29.004329004329, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24644337, Length=261, Percent_Identity=30.2681992337165, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21356301, Length=205, Percent_Identity=24.8780487804878, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357673, Length=226, Percent_Identity=24.3362831858407, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 27330; Mature: 27330

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFGISGKRALVLASSRGLGLGIATALAKEGANVLLVGRSGEKLAENCKAINALGKGKAD
CCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCC
WVWGDLADDNFVESMVQAVEDKLGGIDILVNNTGGPTPGLAQEMTVDKLDTFFQSMVLRV
EEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ITLTNALLPQMKEQGFGRILTVASSGVFEPIPNLALSNTLRGALVGWSKTLSSEVASFGI
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TSNLLLPGRIHTDRIDELDGANAKRLGKSIEEVREASVKGIPAGRLGTVEEFAAAGAFLC
CCCCEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
SVPASYITGTMLRVDGGAAKSN
HCCHHHHCCEEEEECCCCCCCC
>Mature Secondary Structure
MDFGISGKRALVLASSRGLGLGIATALAKEGANVLLVGRSGEKLAENCKAINALGKGKAD
CCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCC
WVWGDLADDNFVESMVQAVEDKLGGIDILVNNTGGPTPGLAQEMTVDKLDTFFQSMVLRV
EEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ITLTNALLPQMKEQGFGRILTVASSGVFEPIPNLALSNTLRGALVGWSKTLSSEVASFGI
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TSNLLLPGRIHTDRIDELDGANAKRLGKSIEEVREASVKGIPAGRLGTVEEFAAAGAFLC
CCCCEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
SVPASYITGTMLRVDGGAAKSN
HCCHHHHCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]