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The map label for this gene is yqfA [H]

Identifier: 159184527

GI number: 159184527

Start: 896956

End: 897624

Strand: Direct

Name: yqfA [H]

Synonym: Atu0906

Alternate gene names: 159184527

Gene position: 896956-897624 (Clockwise)

Preceding gene: 159184526

Following gene: 15888245

Centisome position: 31.57

GC content: 58.89

Gene sequence:

>669_bases
ATGAGTGATTTGTGGCGGTTCGGGCGCCAATATGATTTTTATGAGATCGTCGCCGATGGCATCGTCCACGGTGTTGGCAT
TGTATTTGCGCTCATCGGCGCGACGGCGCTGATTTTTTACGCGATGGCTTGGGGCAGCCTGAGTGCGATTGCGGCCGCAT
GGATTTATGGTCTGGGCCTCGTCGCCTGTCTTTCCGTGTCCTTCACCTACAATATCTGGCCGCATTCCAGGGTGAAATGG
TTCCTGCGCCGGCTCGATCATTCGGCGATCTTCATTCTCATCGCCGCCACCTATACACCGTTTCTGATGCGCGGCATTCA
CGATCCGCTGATCGCCGTGATGCTGGGGCTGATCTGGCTTGCCGCCATCTGCGGCATCCTCCTCAAATGCCTGTTTCCCG
GCCGCTACGACCGGGTGGCCATCGGCCTTTATCTCGCCATGGGCTGGAGCGGCATCATGGTGGTGGAACCCTTGTCGTCG
CATCTCGCTCCCGTCACGCTCTGGCTCATCGTCGCCGGCGGTGTCATCTATTCGCTCGGCGTGATCTTCCACGTCTGGGA
AAAGCTACGCTTCCAGAACGCCATCTGGCACGGTTTCGTCGTCTCCGCCGCCGCCGTCCATTATTTCGCCGTGGTCACCG
CCTTCAGCCTCGTTCCGCTCGCATCATAA

Upstream 100 bases:

>100_bases
AACCTCGAACGCAATTTGATCGCCGTTAACCGGCCGCTGTCTTGTTCCTGTCTAATATTGCCTTCATGCTTTGGTGAAAG
CACGCAGACGGGATTGGACT

Downstream 100 bases:

>100_bases
CGACCGGCGCACTGGACATCGCTCCGCGTCATCGCTTAAGGCTCGTCGCAGAGCCGCCGCCTTTCAGGAGCCGCTCATTT
AGAAATATGAGGGCGAAGCA

Product: hemolysin III

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSDLWRFGRQYDFYEIVADGIVHGVGIVFALIGATALIFYAMAWGSLSAIAAAWIYGLGLVACLSVSFTYNIWPHSRVKW
FLRRLDHSAIFILIAATYTPFLMRGIHDPLIAVMLGLIWLAAICGILLKCLFPGRYDRVAIGLYLAMGWSGIMVVEPLSS
HLAPVTLWLIVAGGVIYSLGVIFHVWEKLRFQNAIWHGFVVSAAAVHYFAVVTAFSLVPLAS

Sequences:

>Translated_222_residues
MSDLWRFGRQYDFYEIVADGIVHGVGIVFALIGATALIFYAMAWGSLSAIAAAWIYGLGLVACLSVSFTYNIWPHSRVKW
FLRRLDHSAIFILIAATYTPFLMRGIHDPLIAVMLGLIWLAAICGILLKCLFPGRYDRVAIGLYLAMGWSGIMVVEPLSS
HLAPVTLWLIVAGGVIYSLGVIFHVWEKLRFQNAIWHGFVVSAAAVHYFAVVTAFSLVPLAS
>Mature_221_residues
SDLWRFGRQYDFYEIVADGIVHGVGIVFALIGATALIFYAMAWGSLSAIAAAWIYGLGLVACLSVSFTYNIWPHSRVKWF
LRRLDHSAIFILIAATYTPFLMRGIHDPLIAVMLGLIWLAAICGILLKCLFPGRYDRVAIGLYLAMGWSGIMVVEPLSSH
LAPVTLWLIVAGGVIYSLGVIFHVWEKLRFQNAIWHGFVVSAAAVHYFAVVTAFSLVPLAS

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI52630445, Length=205, Percent_Identity=35.609756097561, Blast_Score=90, Evalue=1e-18,
Organism=Homo sapiens, GI154759275, Length=205, Percent_Identity=32.1951219512195, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI154759277, Length=233, Percent_Identity=29.1845493562232, Blast_Score=76, Evalue=3e-14,
Organism=Escherichia coli, GI1789266, Length=204, Percent_Identity=37.7450980392157, Blast_Score=147, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI71996356, Length=213, Percent_Identity=30.9859154929577, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24640324, Length=222, Percent_Identity=30.1801801801802, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 24538; Mature: 24406

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLWRFGRQYDFYEIVADGIVHGVGIVFALIGATALIFYAMAWGSLSAIAAAWIYGLGL
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VACLSVSFTYNIWPHSRVKWFLRRLDHSAIFILIAATYTPFLMRGIHDPLIAVMLGLIWL
HHHHHHHHHEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AAICGILLKCLFPGRYDRVAIGLYLAMGWSGIMVVEPLSSHLAPVTLWLIVAGGVIYSLG
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
VIFHVWEKLRFQNAIWHGFVVSAAAVHYFAVVTAFSLVPLAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDLWRFGRQYDFYEIVADGIVHGVGIVFALIGATALIFYAMAWGSLSAIAAAWIYGLGL
CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VACLSVSFTYNIWPHSRVKWFLRRLDHSAIFILIAATYTPFLMRGIHDPLIAVMLGLIWL
HHHHHHHHHEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
AAICGILLKCLFPGRYDRVAIGLYLAMGWSGIMVVEPLSSHLAPVTLWLIVAGGVIYSLG
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
VIFHVWEKLRFQNAIWHGFVVSAAAVHYFAVVTAFSLVPLAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]