Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184517
Identifier: 159184517
GI number: 159184517
Start: 881070
End: 881483
Strand: Direct
Name: 159184517
Synonym: Atu0889
Alternate gene names: NA
Gene position: 881070-881483 (Clockwise)
Preceding gene: 15888225
Following gene: 159184518
Centisome position: 31.01
GC content: 62.8
Gene sequence:
>414_bases ATGGCTTTTTCACGACCGATTCAATGGCCTCAAGCGGCATCGTTGACGCCAAGCGCCTGGGCCAGTGCCTTCAGAACCTG CGATTCGAGGCTTGCCATATCCGGCTGGGCGGAAGCGACCACGTCAGCATTGGCGCCAGTGGAGGCGGAAGCGCTGCTGT TCATGTCCCAGAGAGCAGCGGCCAGGCTGGCGGAGGCACCGGCCAGCGGAGCGACGGCTGTGGCGACATTGCCTGCCACC GAAATGGCGCGATGGGCCGCCCGCGTCAGCTCCTGCAAAGCCTCGGTGGTGGACTGGCTCTCCCGGCTGTGCGCAGGCGC GATGCCGCGGACCGGAGAGGCGAAATTGATGCTGCTGGTTGCTGCGATAGTCGTCATGACTGTGAATCCCCTAGTTCTGA TGGAGCATTTTTAA
Upstream 100 bases:
>100_bases CTGCTCGTAATAGCGGATCGTCGGCACCTTCACGCCGGTGCGTTTCGACAGTTCACCGATGGACAGCATGGCTTTCTCCA TATCTCCAGTCTCTAGAGAT
Downstream 100 bases:
>100_bases GGTCCGAAACATTCGCGAGGATTGCGTCATGCACGCCTTGTGCAAAAAATAACTGCAATATAGTATACCCCCCTATAGTA TATGAGGTGCACATGTCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MAFSRPIQWPQAASLTPSAWASAFRTCDSRLAISGWAEATTSALAPVEAEALLFMSQRAAARLAEAPASGATAVATLPAT EMARWAARVSSCKASVVDWLSRLCAGAMPRTGEAKLMLLVAAIVVMTVNPLVLMEHF
Sequences:
>Translated_137_residues MAFSRPIQWPQAASLTPSAWASAFRTCDSRLAISGWAEATTSALAPVEAEALLFMSQRAAARLAEAPASGATAVATLPAT EMARWAARVSSCKASVVDWLSRLCAGAMPRTGEAKLMLLVAAIVVMTVNPLVLMEHF >Mature_136_residues AFSRPIQWPQAASLTPSAWASAFRTCDSRLAISGWAEATTSALAPVEAEALLFMSQRAAARLAEAPASGATAVATLPATE MARWAARVSSCKASVVDWLSRLCAGAMPRTGEAKLMLLVAAIVVMTVNPLVLMEHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14434; Mature: 14303
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFSRPIQWPQAASLTPSAWASAFRTCDSRLAISGWAEATTSALAPVEAEALLFMSQRAA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHH ARLAEAPASGATAVATLPATEMARWAARVSSCKASVVDWLSRLCAGAMPRTGEAKLMLLV HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH AAIVVMTVNPLVLMEHF HHHHHHHCCHHHEEECC >Mature Secondary Structure AFSRPIQWPQAASLTPSAWASAFRTCDSRLAISGWAEATTSALAPVEAEALLFMSQRAA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHH ARLAEAPASGATAVATLPATEMARWAARVSSCKASVVDWLSRLCAGAMPRTGEAKLMLLV HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH AAIVVMTVNPLVLMEHF HHHHHHHCCHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA