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The map label for this gene is 159184512

Identifier: 159184512

GI number: 159184512

Start: 874407

End: 875138

Strand: Reverse

Name: 159184512

Synonym: Atu0878

Alternate gene names: NA

Gene position: 875138-874407 (Counterclockwise)

Preceding gene: 15888226

Following gene: 15888216

Centisome position: 30.8

GC content: 64.21

Gene sequence:

>732_bases
ATGCGCAAGGCGTCGAGACTGTTCGAGATCATCCAGATCCTGCGGCTGGCGCGCCGCCCGGTGACCGCGCAGACAATTGC
TGACATGCTGGAGGTGACCGCGCGCTCGGTCTATCGCGATATCGCCGCGCTTCAGACCATGCGTGTGCCGATCGAAGGCG
AGCGCGGCGTCGGTTACATCCTGCGTCCCGGCTTCAACCTGCCACCGCTGATGTTTTCCATCGAGGAGACGGAGGCGATC
GTGCTGGCGCTCGCCATGGTCGACCGCTCCGGTGACGCGGAATTGCGCCAGGCGGCGAAAAAGGTCAGCGACAAGATCGC
CGCCTCCCTGCCCGAACCGCTGTCGAAGACACTTTCCGCCAATGCCCTGCACGCCTGGGGCAGCATCGCCCCCGCGCCCG
CCGGCATCGACCTTGCAACGGTCAGGCGGGCGGTGCGCGATGAAGAGCGGCTGGACCTGTGCTATAGCGACGAAAGCGGC
GTGGAAACGCAGCGGCGAATCCGGCCGATTGCGGTGATCTATTATTCCGAGACGGTGAATATCGTCGCCTGGTGCGAATT
GCGCCACGCCATCCGCAATTTCCGTTCGGACCGGGTGCTTGATTGTGCCGCGACGGGCAGCTTCTTCAAGATGGAAGGCG
AGAAGCTGCGGCGATTGTGGATGAGCGGCTGGCAGAGCGGCCAGCCGGGTGGAGAGTTGGGGCGGCCGATCTCAGGCGTC
ACTTTACCGTAA

Upstream 100 bases:

>100_bases
GGGAAAGCATTTGTTTCTCAATGTGTTTTTCCGCTTATAAAAAATGCCAACTGACAACGTTGTGTCAGTTGTGTCGCCCT
ATCACATGGAAATGTACAAT

Downstream 100 bases:

>100_bases
GTACTGCAACACCCGATCCTCCTCGCGTCCAAAACCGCGAATCGCGATCCGATCGGCGAAGACATCGGCGATGGCAAAGG
TGTTCTGGTCGGGCGTATCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; DeoR Family Transcriptional Regulator; Helix-Turn-Helix Domain Containing Protein Type; HTH Domain Family; DeoR-Family Transcriptional Regulator; Transcription Regulator Protein; DeoR-Family Protein Transcriptional Regulator; Regulatory Protein; HTH Domain Protein; NB-Dependent Receptor; Repressor Transcription Regulator Protein; Transcriptional Regulator Protein; HTH Domain-Containing Protein; DeoR Family Transriptional Regulator; Transcription Repressor; Transcription Regulator Protein DeoR Family; HTH Domain-Containing; HTH-Type Transcriptional Regulator YobV; Helix-Turn-Helix Domain-Containing Protein; GntR Family Transcriptional Regulator; Transcriptional Regulator-Like; Bacterial Regulatory Protein DeoR Family; Protein Containing HTH Domain; Transriptional Regulator DeoR Family; Regulatory Protein Deor; HTH Type

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MRKASRLFEIIQILRLARRPVTAQTIADMLEVTARSVYRDIAALQTMRVPIEGERGVGYILRPGFNLPPLMFSIEETEAI
VLALAMVDRSGDAELRQAAKKVSDKIAASLPEPLSKTLSANALHAWGSIAPAPAGIDLATVRRAVRDEERLDLCYSDESG
VETQRRIRPIAVIYYSETVNIVAWCELRHAIRNFRSDRVLDCAATGSFFKMEGEKLRRLWMSGWQSGQPGGELGRPISGV
TLP

Sequences:

>Translated_243_residues
MRKASRLFEIIQILRLARRPVTAQTIADMLEVTARSVYRDIAALQTMRVPIEGERGVGYILRPGFNLPPLMFSIEETEAI
VLALAMVDRSGDAELRQAAKKVSDKIAASLPEPLSKTLSANALHAWGSIAPAPAGIDLATVRRAVRDEERLDLCYSDESG
VETQRRIRPIAVIYYSETVNIVAWCELRHAIRNFRSDRVLDCAATGSFFKMEGEKLRRLWMSGWQSGQPGGELGRPISGV
TLP
>Mature_243_residues
MRKASRLFEIIQILRLARRPVTAQTIADMLEVTARSVYRDIAALQTMRVPIEGERGVGYILRPGFNLPPLMFSIEETEAI
VLALAMVDRSGDAELRQAAKKVSDKIAASLPEPLSKTLSANALHAWGSIAPAPAGIDLATVRRAVRDEERLDLCYSDESG
VETQRRIRPIAVIYYSETVNIVAWCELRHAIRNFRSDRVLDCAATGSFFKMEGEKLRRLWMSGWQSGQPGGELGRPISGV
TLP

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26963; Mature: 26963

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKASRLFEIIQILRLARRPVTAQTIADMLEVTARSVYRDIAALQTMRVPIEGERGVGYI
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
LRPGFNLPPLMFSIEETEAIVLALAMVDRSGDAELRQAAKKVSDKIAASLPEPLSKTLSA
ECCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCC
NALHAWGSIAPAPAGIDLATVRRAVRDEERLDLCYSDESGVETQRRIRPIAVIYYSETVN
CHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHEEECCCCCCCHHHHCCEEEEEEEECCCC
IVAWCELRHAIRNFRSDRVLDCAATGSFFKMEGEKLRRLWMSGWQSGQPGGELGRPISGV
HHHHHHHHHHHHHCCCCCEEEECCCCCCEEECHHHHHHHHHHCCCCCCCCHHHCCCCCCC
TLP
CCC
>Mature Secondary Structure
MRKASRLFEIIQILRLARRPVTAQTIADMLEVTARSVYRDIAALQTMRVPIEGERGVGYI
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
LRPGFNLPPLMFSIEETEAIVLALAMVDRSGDAELRQAAKKVSDKIAASLPEPLSKTLSA
ECCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCC
NALHAWGSIAPAPAGIDLATVRRAVRDEERLDLCYSDESGVETQRRIRPIAVIYYSETVN
CHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHEEECCCCCCCHHHHCCEEEEEEEECCCC
IVAWCELRHAIRNFRSDRVLDCAATGSFFKMEGEKLRRLWMSGWQSGQPGGELGRPISGV
HHHHHHHHHHHHHCCCCCEEEECCCCCCEEECHHHHHHHHHHCCCCCCCCHHHCCCCCCC
TLP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA