Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is qor [H]
Identifier: 159184482
GI number: 159184482
Start: 822932
End: 823915
Strand: Reverse
Name: qor [H]
Synonym: Atu0825
Alternate gene names: 159184482
Gene position: 823915-822932 (Counterclockwise)
Preceding gene: 15888166
Following gene: 159184481
Centisome position: 28.99
GC content: 61.79
Gene sequence:
>984_bases ATGCGCTTCATCGATCTTCCGTCCCATGGTGGCCCGGAAGTGATGCAGTCTTCAAAAGCACCTTTGCCGAAACCCGCCCG CGGGGAGATTCTCGTTAAGGTCGAGGCGGCGGGGGTTAACCGTCCAGACGTCGCGCAGAGACAGGGCATCTATCCGCCAC CCAAAGGTGCAAGCCCCATCCTCGGGCTGGAAATCGCCGGCGAGGTCGTTGCACTCGGAGAGGGCGTCGATGAGTTCAAG CTCGGCGACAAGGTCTGTGCGCTCGCCAATGGCGGCGGTTACGCGGAATATTGCGCCGTTCCCGCCGGGCAGGCCCTGCC CTTCCCCAAAGGTTACGACGCCGTCAAAGCTGCCGCACTGCCGGAAACCTTCTTCACCGTCTGGGCCAATCTCTTCCAGA TGGCTGGCCTGACGGAAGGTGAGACCGTGCTCATCCACGGCGGCACCAGCGGCATCGGCACAACGGCGATCCAGCTTGCG AAAGCCTTTGGCGCTGAGGTTTATGCCACGGCGGGCTCGGCGGAAAAATGCGAGGCCTGCGTGAAGCTCGGCACTAAGCG CGCGATCAACTACCGCGAGGAGGATTTCGCCGAAATCGTGAAATCCGAAACCGGCGGCAAGGGCGTCGATGTCGTTCTCG ACATGATCGGTGCGGCCTATTTCGAAAAGAACCTTGCGGCCCTCGCCAAGGATGGCTGCCTTTCCATCATCGCCTTTCTG GGTGGTGCGACAGCCGAGAAGGTCGACCTGCGGCCGATCATGGTCAAACGCCTCACCGTCACCGGCTCCACCATGCGCCC CCGAACGGCCGACGAGAAGCGCGCCATCCGCGATGAGCTTGTCGAGCAGGTCTGGCCGCTCATCGAAAGCGGCAAGGTCG CGCCTGTGATCAACCGGGTGTTCACGCTGGAAGAGGTCGTGGACGCGCACCGGTTGATGGAAAGCAGCAATCATATCGGC AAGATCGTGATGAAGGTGTCGTGA
Upstream 100 bases:
>100_bases TCCTTCCCTCAAGCGCACATCTGACCTACATCTTCAGGTGACGCCGACAAGTGAGGAGTTGCCCCTACCCATGTCCGACA CCAAGACCCTGCCCGAAACA
Downstream 100 bases:
>100_bases CGAGTGCCTCTTGCATTAATGACGAATCGTACTACCTTCTAGTTATGTTCAACGTATCGGAAGGAGGTGATCCAATGTCT AGTGAGATTTCGGTCTCTGG
Product: quinone oxidoreductase
Products: NA
Alternate protein names: NADPH:quinone reductase 1; Zeta-crystallin homolog protein [H]
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MRFIDLPSHGGPEVMQSSKAPLPKPARGEILVKVEAAGVNRPDVAQRQGIYPPPKGASPILGLEIAGEVVALGEGVDEFK LGDKVCALANGGGYAEYCAVPAGQALPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGETVLIHGGTSGIGTTAIQLA KAFGAEVYATAGSAEKCEACVKLGTKRAINYREEDFAEIVKSETGGKGVDVVLDMIGAAYFEKNLAALAKDGCLSIIAFL GGATAEKVDLRPIMVKRLTVTGSTMRPRTADEKRAIRDELVEQVWPLIESGKVAPVINRVFTLEEVVDAHRLMESSNHIG KIVMKVS
Sequences:
>Translated_327_residues MRFIDLPSHGGPEVMQSSKAPLPKPARGEILVKVEAAGVNRPDVAQRQGIYPPPKGASPILGLEIAGEVVALGEGVDEFK LGDKVCALANGGGYAEYCAVPAGQALPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGETVLIHGGTSGIGTTAIQLA KAFGAEVYATAGSAEKCEACVKLGTKRAINYREEDFAEIVKSETGGKGVDVVLDMIGAAYFEKNLAALAKDGCLSIIAFL GGATAEKVDLRPIMVKRLTVTGSTMRPRTADEKRAIRDELVEQVWPLIESGKVAPVINRVFTLEEVVDAHRLMESSNHIG KIVMKVS >Mature_327_residues MRFIDLPSHGGPEVMQSSKAPLPKPARGEILVKVEAAGVNRPDVAQRQGIYPPPKGASPILGLEIAGEVVALGEGVDEFK LGDKVCALANGGGYAEYCAVPAGQALPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGETVLIHGGTSGIGTTAIQLA KAFGAEVYATAGSAEKCEACVKLGTKRAINYREEDFAEIVKSETGGKGVDVVLDMIGAAYFEKNLAALAKDGCLSIIAFL GGATAEKVDLRPIMVKRLTVTGSTMRPRTADEKRAIRDELVEQVWPLIESGKVAPVINRVFTLEEVVDAHRLMESSNHIG KIVMKVS
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=330, Percent_Identity=39.0909090909091, Blast_Score=241, Evalue=6e-64, Organism=Homo sapiens, GI22538444, Length=330, Percent_Identity=39.0909090909091, Blast_Score=241, Evalue=6e-64, Organism=Homo sapiens, GI194239674, Length=331, Percent_Identity=30.2114803625378, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI13236495, Length=331, Percent_Identity=30.2114803625378, Blast_Score=152, Evalue=5e-37, Organism=Homo sapiens, GI24308257, Length=346, Percent_Identity=30.3468208092486, Blast_Score=125, Evalue=7e-29, Organism=Homo sapiens, GI18379349, Length=312, Percent_Identity=29.1666666666667, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI194239676, Length=331, Percent_Identity=26.8882175226586, Blast_Score=118, Evalue=8e-27, Organism=Homo sapiens, GI28557745, Length=259, Percent_Identity=33.2046332046332, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI41872631, Length=313, Percent_Identity=27.1565495207668, Blast_Score=95, Evalue=8e-20, Organism=Homo sapiens, GI197927207, Length=196, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI47519420, Length=338, Percent_Identity=28.4023668639053, Blast_Score=90, Evalue=3e-18, Organism=Escherichia coli, GI1790485, Length=319, Percent_Identity=35.1097178683386, Blast_Score=145, Evalue=3e-36, Organism=Escherichia coli, GI87081918, Length=208, Percent_Identity=27.4038461538462, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI17507255, Length=327, Percent_Identity=27.5229357798165, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI212642053, Length=312, Percent_Identity=27.2435897435897, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17536829, Length=294, Percent_Identity=25.5102040816327, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71988145, Length=297, Percent_Identity=25.2525252525253, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=329, Percent_Identity=30.3951367781155, Blast_Score=120, Evalue=4e-28, Organism=Saccharomyces cerevisiae, GI6323961, Length=291, Percent_Identity=27.4914089347079, Blast_Score=89, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6324486, Length=349, Percent_Identity=26.647564469914, Blast_Score=86, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6319621, Length=291, Percent_Identity=27.1477663230241, Blast_Score=69, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6323729, Length=336, Percent_Identity=23.8095238095238, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI19920632, Length=271, Percent_Identity=28.4132841328413, Blast_Score=104, Evalue=7e-23, Organism=Drosophila melanogaster, GI221330659, Length=271, Percent_Identity=28.4132841328413, Blast_Score=104, Evalue=7e-23, Organism=Drosophila melanogaster, GI24581345, Length=271, Percent_Identity=29.1512915129151, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI45550423, Length=298, Percent_Identity=27.1812080536913, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34595; Mature: 34595
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFIDLPSHGGPEVMQSSKAPLPKPARGEILVKVEAAGVNRPDVAQRQGIYPPPKGASPI CCEEECCCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCE LGLEIAGEVVALGEGVDEFKLGDKVCALANGGGYAEYCAVPAGQALPFPKGYDAVKAAAL EEHHHCCCEEEECCCCHHHHCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCHHHHHHHC PETFFTVWANLFQMAGLTEGETVLIHGGTSGIGTTAIQLAKAFGAEVYATAGSAEKCEAC HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHH VKLGTKRAINYREEDFAEIVKSETGGKGVDVVLDMIGAAYFEKNLAALAKDGCLSIIAFL HHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGATAEKVDLRPIMVKRLTVTGSTMRPRTADEKRAIRDELVEQVWPLIESGKVAPVINRV CCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FTLEEVVDAHRLMESSNHIGKIVMKVS HHHHHHHHHHHHHHCCCCCEEEEEEEC >Mature Secondary Structure MRFIDLPSHGGPEVMQSSKAPLPKPARGEILVKVEAAGVNRPDVAQRQGIYPPPKGASPI CCEEECCCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCE LGLEIAGEVVALGEGVDEFKLGDKVCALANGGGYAEYCAVPAGQALPFPKGYDAVKAAAL EEHHHCCCEEEECCCCHHHHCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCHHHHHHHC PETFFTVWANLFQMAGLTEGETVLIHGGTSGIGTTAIQLAKAFGAEVYATAGSAEKCEAC HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHH VKLGTKRAINYREEDFAEIVKSETGGKGVDVVLDMIGAAYFEKNLAALAKDGCLSIIAFL HHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGATAEKVDLRPIMVKRLTVTGSTMRPRTADEKRAIRDELVEQVWPLIESGKVAPVINRV CCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FTLEEVVDAHRLMESSNHIGKIVMKVS HHHHHHHHHHHHHHCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7602590 [H]