| Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
|---|---|
| Accession | NC_003062 |
| Length | 2,841,580 |
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The map label for this gene is mqo [H]
Identifier: 159184474
GI number: 159184474
Start: 810350
End: 811984
Strand: Reverse
Name: mqo [H]
Synonym: Atu0811
Alternate gene names: 159184474
Gene position: 811984-810350 (Counterclockwise)
Preceding gene: 15888155
Following gene: 15888153
Centisome position: 28.58
GC content: 61.53
Gene sequence:
>1635_bases CTGGGCGGCGCGCTCGCCGGAATTGCCGCAGCGGCACTGCCCTCTGCACCGCTTCTCGCCAATATGGCTGCCAAGAAGGT CGATGTGCTCCTCATCGGCGGCGGCATCATGAGCGCGACGCTCGGTGTGTGGCTTCGCGAACTGGAGCCCACCTGGTCGA TGCAGATGCTGGAGCGGCTGGATGGCGTGGCGCTTGAAAGCTCCAACGGCTGGAACAATGCCGGCACCGGTCACTCCGCG CTTGCCGAACTGAATTACACGCCGGAAGACGACAACGGCAACATCAAGATCACGCAAGCCGTCAACATCAACGAATCCTT CCAGATTTCCCGGCAGTTCTGGGCATGGCAGGTGCGCAACGGCGTTTTGAAGAACCCGCGCTCCTTCATCAACCACACAC CGCATATGAGCTTCGTCTGGGGTGACGAGAACGTCGCCTATCTGGAAAAGCGTTATCAGGCACTGAAGGCCAGCCCACTT TTCGCCGGCATGGAATTCTCCACCGATCCGGAACAGATCAAGAAGTGGGTGCCGCTGATGATGGAGGGCCGTGATCCTTC CCAGAAGCTCGGCGCGACCTGGTCGCCGCTCGGCACGGACATGGAATTTGGCGAAATTACCCGCCAATTCGTATCGCATC TGCAGAGCGACCAGAATTTCGACCTGCAGGTCAATAGCGAGGTTTCCGACATCCAACGCAATGCCGATGGCAGCTGGCGC GTGACCTATACCAACACCAAGACCGATGCCGAACAGGTGGTGGACGCGAAATTCGTGTTCATCGGCGCCGGCGGCGGTGC GCTGCATCTTTTGCAGATGTCCGGCGTTCCCGAGGCCGATGACTATGCCGGTTTCCCCGTGGGCGGCTCGTTCCTCATCA ACGAGAACCCCGACGTGACGATGCAGCATCTCGCCAAGGCCTACGGCAAGGCCTCTGTCGGCTCGCCGCCCATGTCGGTG CCGCATCTCGATACCCGCGTGCTGGGCGGCAAGCGTGTCATCCTGTTTGGGCCTTTCGCCACCTTCTCCACCAAGTTCCT GAAGGAAGGCTCCTATTTCGATCTCGTCTCCTCCGTCACGACCAGCAATGCCTGGCCGATGGTGCGGGTGGGCATCGATG AATATCCGCTGGTGGAATATCTCGCGGGCCAGCTGATGATGTCGGATGACGACCGTTTTGCCGCGCTGAAGGAATATTTC CCCAATGCCAAGCAGGGCGAATGGCGCCTGTGGCAGGCCGGCCAGCGCGTGCAGATCATCAAGCGCGACGAGGAAAAGGG CGGCGTGCTGCGGCTCGGCACCGAAGTCGTCGCTGCCAAGGACGGCAGCATCGCCGGCCTGCTCGGCGCTTCGCCGGGTG CCTCGACCGCAGCACCGATCATGCTCAGCGTTCTGGAAAAGGTCTTCAAGGACAAGGTGGCAACGCCGGAATGGCAGGCG AAACTGCGCCAGATCGTGCCGAGCTACGGCACCAAGCTCAATGACGACCCGGAAAAGGTGCGTGAGGAGTGGGCTTACAC CGCTGAACACCTGCAACTGCCGACGCCGCCGCAGATCGATCTCGAGGCGCTGAAGGGTGCCGGCGCGGCGCCTGCGGGTG CGCCGGTGAAGAAGGTGCCGGATATCGCGCTTTAA
Upstream 100 bases:
>100_bases CACAAAACAAGAATCAGGTATGGCCGTGACTCCCATCGATCAAGACAAATCCCAGCTCACTGATCTCTCCCATGCATTTC CGCTGAACCGCCGACAGGTT
Downstream 100 bases:
>100_bases GGTTTAGCTGCGAAATTTAAGATTGGACGCCGCGTGTCTCTGGATGCGCGGCGTTTTTGTTGGAGGCGACTTCTTAATAT CCAACGCATCCGGTTCCATT
Product: malate:quinone oxidoreductase
Products: NA
Alternate protein names: MQO; Malate dehydrogenase [quinone] [H]
Number of amino acids: Translated: 544; Mature: 543
Protein sequence:
>544_residues MGGALAGIAAAALPSAPLLANMAAKKVDVLLIGGGIMSATLGVWLRELEPTWSMQMLERLDGVALESSNGWNNAGTGHSA LAELNYTPEDDNGNIKITQAVNINESFQISRQFWAWQVRNGVLKNPRSFINHTPHMSFVWGDENVAYLEKRYQALKASPL FAGMEFSTDPEQIKKWVPLMMEGRDPSQKLGATWSPLGTDMEFGEITRQFVSHLQSDQNFDLQVNSEVSDIQRNADGSWR VTYTNTKTDAEQVVDAKFVFIGAGGGALHLLQMSGVPEADDYAGFPVGGSFLINENPDVTMQHLAKAYGKASVGSPPMSV PHLDTRVLGGKRVILFGPFATFSTKFLKEGSYFDLVSSVTTSNAWPMVRVGIDEYPLVEYLAGQLMMSDDDRFAALKEYF PNAKQGEWRLWQAGQRVQIIKRDEEKGGVLRLGTEVVAAKDGSIAGLLGASPGASTAAPIMLSVLEKVFKDKVATPEWQA KLRQIVPSYGTKLNDDPEKVREEWAYTAEHLQLPTPPQIDLEALKGAGAAPAGAPVKKVPDIAL
Sequences:
>Translated_544_residues MGGALAGIAAAALPSAPLLANMAAKKVDVLLIGGGIMSATLGVWLRELEPTWSMQMLERLDGVALESSNGWNNAGTGHSA LAELNYTPEDDNGNIKITQAVNINESFQISRQFWAWQVRNGVLKNPRSFINHTPHMSFVWGDENVAYLEKRYQALKASPL FAGMEFSTDPEQIKKWVPLMMEGRDPSQKLGATWSPLGTDMEFGEITRQFVSHLQSDQNFDLQVNSEVSDIQRNADGSWR VTYTNTKTDAEQVVDAKFVFIGAGGGALHLLQMSGVPEADDYAGFPVGGSFLINENPDVTMQHLAKAYGKASVGSPPMSV PHLDTRVLGGKRVILFGPFATFSTKFLKEGSYFDLVSSVTTSNAWPMVRVGIDEYPLVEYLAGQLMMSDDDRFAALKEYF PNAKQGEWRLWQAGQRVQIIKRDEEKGGVLRLGTEVVAAKDGSIAGLLGASPGASTAAPIMLSVLEKVFKDKVATPEWQA KLRQIVPSYGTKLNDDPEKVREEWAYTAEHLQLPTPPQIDLEALKGAGAAPAGAPVKKVPDIAL >Mature_543_residues GGALAGIAAAALPSAPLLANMAAKKVDVLLIGGGIMSATLGVWLRELEPTWSMQMLERLDGVALESSNGWNNAGTGHSAL AELNYTPEDDNGNIKITQAVNINESFQISRQFWAWQVRNGVLKNPRSFINHTPHMSFVWGDENVAYLEKRYQALKASPLF AGMEFSTDPEQIKKWVPLMMEGRDPSQKLGATWSPLGTDMEFGEITRQFVSHLQSDQNFDLQVNSEVSDIQRNADGSWRV TYTNTKTDAEQVVDAKFVFIGAGGGALHLLQMSGVPEADDYAGFPVGGSFLINENPDVTMQHLAKAYGKASVGSPPMSVP HLDTRVLGGKRVILFGPFATFSTKFLKEGSYFDLVSSVTTSNAWPMVRVGIDEYPLVEYLAGQLMMSDDDRFAALKEYFP NAKQGEWRLWQAGQRVQIIKRDEEKGGVLRLGTEVVAAKDGSIAGLLGASPGASTAAPIMLSVLEKVFKDKVATPEWQAK LRQIVPSYGTKLNDDPEKVREEWAYTAEHLQLPTPPQIDLEALKGAGAAPAGAPVKKVPDIAL
Specific function: Tricarboxylic acid cycle. [C]
COG id: COG0579
COG function: function code R; Predicted dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MQO family [H]
Homologues:
Organism=Escherichia coli, GI1788539, Length=525, Percent_Identity=64.9523809523809, Blast_Score=699, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006231 [H]
Pfam domain/function: PF06039 Mqo [H]
EC number: =1.1.5.4 [H]
Molecular weight: Translated: 59255; Mature: 59124
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00626 RCC1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGALAGIAAAALPSAPLLANMAAKKVDVLLIGGGIMSATLGVWLRELEPTWSMQMLERL CCCHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHH DGVALESSNGWNNAGTGHSALAELNYTPEDDNGNIKITQAVNINESFQISRQFWAWQVRN CCEEEECCCCCCCCCCCCHHHEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHC GVLKNPRSFINHTPHMSFVWGDENVAYLEKRYQALKASPLFAGMEFSTDPEQIKKWVPLM CCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHCCCE MEGRDPSQKLGATWSPLGTDMEFGEITRQFVSHLQSDQNFDLQVNSEVSDIQRNADGSWR ECCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHCCCCCEE VTYTNTKTDAEQVVDAKFVFIGAGGGALHLLQMSGVPEADDYAGFPVGGSFLINENPDVT EEEECCCCCHHHHCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCHH MQHLAKAYGKASVGSPPMSVPHLDTRVLGGKRVILFGPFATFSTKFLKEGSYFDLVSSVT HHHHHHHHCCCCCCCCCCCCCCCCCEECCCCEEEEEECHHHHHHHHHHCCCHHHHHHHHH TSNAWPMVRVGIDEYPLVEYLAGQLMMSDDDRFAALKEYFPNAKQGEWRLWQAGQRVQII CCCCCCEEEECCCCCHHHHHHHCCEEECCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEE KRDEEKGGVLRLGTEVVAAKDGSIAGLLGASPGASTAAPIMLSVLEKVFKDKVATPEWQA ECCCCCCCEEEECCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH KLRQIVPSYGTKLNDDPEKVREEWAYTAEHLQLPTPPQIDLEALKGAGAAPAGAPVKKVP HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCHHCCC DIAL CCCC >Mature Secondary Structure GGALAGIAAAALPSAPLLANMAAKKVDVLLIGGGIMSATLGVWLRELEPTWSMQMLERL CCHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHH DGVALESSNGWNNAGTGHSALAELNYTPEDDNGNIKITQAVNINESFQISRQFWAWQVRN CCEEEECCCCCCCCCCCCHHHEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHC GVLKNPRSFINHTPHMSFVWGDENVAYLEKRYQALKASPLFAGMEFSTDPEQIKKWVPLM CCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHCCCE MEGRDPSQKLGATWSPLGTDMEFGEITRQFVSHLQSDQNFDLQVNSEVSDIQRNADGSWR ECCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHCCCCCEE VTYTNTKTDAEQVVDAKFVFIGAGGGALHLLQMSGVPEADDYAGFPVGGSFLINENPDVT EEEECCCCCHHHHCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCHH MQHLAKAYGKASVGSPPMSVPHLDTRVLGGKRVILFGPFATFSTKFLKEGSYFDLVSSVT HHHHHHHHCCCCCCCCCCCCCCCCCEECCCCEEEEEECHHHHHHHHHHCCCHHHHHHHHH TSNAWPMVRVGIDEYPLVEYLAGQLMMSDDDRFAALKEYFPNAKQGEWRLWQAGQRVQII CCCCCCEEEECCCCCHHHHHHHCCEEECCCHHHHHHHHHCCCCCCCCEEEECCCCEEEEE KRDEEKGGVLRLGTEVVAAKDGSIAGLLGASPGASTAAPIMLSVLEKVFKDKVATPEWQA ECCCCCCCEEEECCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH KLRQIVPSYGTKLNDDPEKVREEWAYTAEHLQLPTPPQIDLEALKGAGAAPAGAPVKKVP HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCHHCCC DIAL CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]