Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159184454
Identifier: 159184454
GI number: 159184454
Start: 757641
End: 758360
Strand: Reverse
Name: 159184454
Synonym: Atu0761
Alternate gene names: NA
Gene position: 758360-757641 (Counterclockwise)
Preceding gene: 15888106
Following gene: 15888102
Centisome position: 26.69
GC content: 62.92
Gene sequence:
>720_bases ATGTTTGCCGGGGCCGCGTGCCTTGCCGGCCTTGCCCGCGGTTTTTCCGGTTTTGGTGCGGCGCTCATCTTCATTCCGCT TGCGAGCGCCATTGTCGGCCCGCGCATCGCCTCGGCGGTGCTGCTGGTGGTTGACGGCGTCCTGACGCTCGGCATGATCC CGCCCGCCTTTCGCATGGCGGACCGGCGCGAGGTTTTCATCATGGCCGCCGGCGCTTTTGTCGGCGTGCCCATTGGAACC CTACTGCTTTCAAAGGGTGATCCGCTGACTCTGCGCTGGCTCATCTCCGGCGTGGTCGTGGTGCTGCTGGTGTTTCTGGT GTCCGGCTGGCGTTACAGCGGCCGGCCGAAAACGCCGCTCACCCTCTTCACCGGGCTTCTGGCCGGGCTGTTTTCGGGGG CCGCGCAGCTGGGCGGCCCGCCGGTTGTCGCCTATTGGCTGGGTGGTGCGCTGAAAGGCGCTTTTGTGCGCGCCAATGTC ATTCTTTATTTCGCGGTTTCGACAGTCTTCTCCATCGCCAGCTATTTTGTCAGTGGCCTGTTCACCGTCGATGTCTTCGT GTTTTTCCTGCTGGCCCTGCCCTTTTATGCGGTGGGCCTTTATGCCGGCGCGCGATTGCATGGGCTTGCCGATGAAGCGG CGTTCCGGCGCATCTGCTACGGTCTGATCGCCATTTCCGCGGTGATCGGCCTGCCGCTGTTTGATTCGCTGCTGAAATAG
Upstream 100 bases:
>100_bases GAGATAGGGAAAAGATATTCGAACAAACGTGCCATCACCCATGTCCCATCTCGACTTCCTGTCGTCGCTCATCACCGCGC ATAGTCCCATGCTGCTTGCC
Downstream 100 bases:
>100_bases GCAGGCCGCGATGGCCTGCCCTGATGGCGTTCAGGGATACATGCGGACCTTGGACCAGGCACCGTCGGGCGTCTCGCGAC GGAATTCGATGCGGTCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MFAGAACLAGLARGFSGFGAALIFIPLASAIVGPRIASAVLLVVDGVLTLGMIPPAFRMADRREVFIMAAGAFVGVPIGT LLLSKGDPLTLRWLISGVVVVLLVFLVSGWRYSGRPKTPLTLFTGLLAGLFSGAAQLGGPPVVAYWLGGALKGAFVRANV ILYFAVSTVFSIASYFVSGLFTVDVFVFFLLALPFYAVGLYAGARLHGLADEAAFRRICYGLIAISAVIGLPLFDSLLK
Sequences:
>Translated_239_residues MFAGAACLAGLARGFSGFGAALIFIPLASAIVGPRIASAVLLVVDGVLTLGMIPPAFRMADRREVFIMAAGAFVGVPIGT LLLSKGDPLTLRWLISGVVVVLLVFLVSGWRYSGRPKTPLTLFTGLLAGLFSGAAQLGGPPVVAYWLGGALKGAFVRANV ILYFAVSTVFSIASYFVSGLFTVDVFVFFLLALPFYAVGLYAGARLHGLADEAAFRRICYGLIAISAVIGLPLFDSLLK >Mature_239_residues MFAGAACLAGLARGFSGFGAALIFIPLASAIVGPRIASAVLLVVDGVLTLGMIPPAFRMADRREVFIMAAGAFVGVPIGT LLLSKGDPLTLRWLISGVVVVLLVFLVSGWRYSGRPKTPLTLFTGLLAGLFSGAAQLGGPPVVAYWLGGALKGAFVRANV ILYFAVSTVFSIASYFVSGLFTVDVFVFFLLALPFYAVGLYAGARLHGLADEAAFRRICYGLIAISAVIGLPLFDSLLK
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24982; Mature: 24982
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAGAACLAGLARGFSGFGAALIFIPLASAIVGPRIASAVLLVVDGVLTLGMIPPAFRMA CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC DRREVFIMAAGAFVGVPIGTLLLSKGDPLTLRWLISGVVVVLLVFLVSGWRYSGRPKTPL CCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH TLFTGLLAGLFSGAAQLGGPPVVAYWLGGALKGAFVRANVILYFAVSTVFSIASYFVSGL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTVDVFVFFLLALPFYAVGLYAGARLHGLADEAAFRRICYGLIAISAVIGLPLFDSLLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFAGAACLAGLARGFSGFGAALIFIPLASAIVGPRIASAVLLVVDGVLTLGMIPPAFRMA CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC DRREVFIMAAGAFVGVPIGTLLLSKGDPLTLRWLISGVVVVLLVFLVSGWRYSGRPKTPL CCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH TLFTGLLAGLFSGAAQLGGPPVVAYWLGGALKGAFVRANVILYFAVSTVFSIASYFVSGL HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTVDVFVFFLLALPFYAVGLYAGARLHGLADEAAFRRICYGLIAISAVIGLPLFDSLLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA