Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is atpB
Identifier: 159184432
GI number: 159184432
Start: 717013
End: 717654
Strand: Direct
Name: atpB
Synonym: Atu0716
Alternate gene names: 159184432
Gene position: 717013-717654 (Clockwise)
Preceding gene: 15888059
Following gene: 15888061
Centisome position: 25.23
GC content: 62.93
Gene sequence:
>642_bases ATGTTCGTGACCGAGGCTTATGCCCAGTCAGCACCGACCGTAGGTGAAACGCATACGGAAACTCCGGCCGTCGGCCAGCC GCAACCGGAAGCCACGCACACGGAAACCGGTGTAGCGCATGGCGCCGAACACGGTGCTTCCGGCGTTTTCCCGCCGTTCG ACCAGTCTACTTATGCATCGCAGGTCCTGTGGCTCGCGATCACGTTCGGCCTTTTCTACCTGCTCATGCAGAAGGTCATC GTTCCGCGCGTCGGCGGCATTCTCGAAAACCGTCACGGACGCATCGCACAGGATCTCGACGAAGCGGCGCGGCTGAAAGC CGAAGCCGACACAGCCGTCGAAACCTATGAAAAAGAACTCGCGGCAGCCCGCGCCAAGGCAAGCTCGATCGGCGCCTCGG CACGTGACGCCGCCAAGGCGAAGGCCGATGCCGACCGCGCCGCAATCGAAGCCGGTCTTGCTGAGAAGCTCGCCGCCGCC GAAAAGCGCATTGCGGGTATCAGGGATCATGCATTCGCGGATGTTGGCGCAATCGCCGAGGAAACCGCGACCGCAATCGT CGACCAGCTGGTTGGCGCCAAGGTCAAGGATACCGACGTCAAGGCCGCCATTGCCGCCGCTTCTGCCGTGAAGGGAGCCT GA
Upstream 100 bases:
>100_bases CTTCTCCTGTTCGCTGTCTGATAACGGCATCAGGTCTGGATCACGGCCCGCAAATGGCGTGCCGTGATCCTTCGCATTTG CAGTCCCCCTGGAGGTGAGC
Downstream 100 bases:
>100_bases CATGGCATTTGATGCATCATTTTTCGCTCTCGTCGGTCTCGTCCTTTTCTTTGTCCTGATCGCCTATCTCAAGGTTCCGG GCATGCTCTCCAAGTCTCTG
Product: F0F1 ATP synthase subunit B'
Products: ADP; phosphate; H+
Alternate protein names: ATP synthase F(0) sector subunit b/b'; ATPase subunit II; F-type ATPase subunit b/b'; F-ATPase subunit b/b'
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MFVTEAYAQSAPTVGETHTETPAVGQPQPEATHTETGVAHGAEHGASGVFPPFDQSTYASQVLWLAITFGLFYLLMQKVI VPRVGGILENRHGRIAQDLDEAARLKAEADTAVETYEKELAAARAKASSIGASARDAAKAKADADRAAIEAGLAEKLAAA EKRIAGIRDHAFADVGAIAEETATAIVDQLVGAKVKDTDVKAAIAAASAVKGA
Sequences:
>Translated_213_residues MFVTEAYAQSAPTVGETHTETPAVGQPQPEATHTETGVAHGAEHGASGVFPPFDQSTYASQVLWLAITFGLFYLLMQKVI VPRVGGILENRHGRIAQDLDEAARLKAEADTAVETYEKELAAARAKASSIGASARDAAKAKADADRAAIEAGLAEKLAAA EKRIAGIRDHAFADVGAIAEETATAIVDQLVGAKVKDTDVKAAIAAASAVKGA >Mature_213_residues MFVTEAYAQSAPTVGETHTETPAVGQPQPEATHTETGVAHGAEHGASGVFPPFDQSTYASQVLWLAITFGLFYLLMQKVI VPRVGGILENRHGRIAQDLDEAARLKAEADTAVETYEKELAAARAKASSIGASARDAAKAKADADRAAIEAGLAEKLAAA EKRIAGIRDHAFADVGAIAEETATAIVDQLVGAKVKDTDVKAAIAAASAVKGA
Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria
COG id: COG0711
COG function: function code C; F0F1-type ATP synthase, subunit b
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATPase B chain family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATPX_AGRT5 (Q7D0U9)
Other databases:
- EMBL: AE007869 - RefSeq: NP_353741.2 - STRING: Q7D0U9 - GeneID: 1132754 - GenomeReviews: AE007869_GR - KEGG: atu:Atu0716 - eggNOG: COG0711 - HOGENOM: HBG656755 - OMA: GEVHTET - ProtClustDB: PRK09174 - HAMAP: MF_01399 - InterPro: IPR002146
Pfam domain/function: PF00430 ATP-synt_B
EC number: 3.6.3.14
Molecular weight: Translated: 22033; Mature: 22033
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xbe7cedc)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVTEAYAQSAPTVGETHTETPAVGQPQPEATHTETGVAHGAEHGASGVFPPFDQSTYAS CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHCCCCCCCCCCCCHHHHH QVLWLAITFGLFYLLMQKVIVPRVGGILENRHGRIAQDLDEAARLKAEADTAVETYEKEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AAARAKASSIGASARDAAKAKADADRAAIEAGLAEKLAAAEKRIAGIRDHAFADVGAIAE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETATAIVDQLVGAKVKDTDVKAAIAAASAVKGA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCH >Mature Secondary Structure MFVTEAYAQSAPTVGETHTETPAVGQPQPEATHTETGVAHGAEHGASGVFPPFDQSTYAS CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCHHCCCCCCCCCCCCHHHHH QVLWLAITFGLFYLLMQKVIVPRVGGILENRHGRIAQDLDEAARLKAEADTAVETYEKEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AAARAKASSIGASARDAAKAKADADRAAIEAGLAEKLAAAEKRIAGIRDHAFADVGAIAE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ETATAIVDQLVGAKVKDTDVKAAIAAASAVKGA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O; H+
Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194