Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184392
Identifier: 159184392
GI number: 159184392
Start: 611204
End: 612187
Strand: Direct
Name: 159184392
Synonym: Atu0622
Alternate gene names: NA
Gene position: 611204-612187 (Clockwise)
Preceding gene: 159184390
Following gene: 159184393
Centisome position: 21.51
GC content: 60.57
Gene sequence:
>984_bases ATGAGCAGACGCGGCCTCATCGGTGCGGCTGGCGCCAGTGTCCTCGGCGCGCCGCTGTTGATGGCGCGCGGCGCGAACGC CCAGACCAACCAGCCGCAGACCTCCATGGAGATAAAACACGCCATGCCGCCGGAAACCAATCGCTTCAAGCTCGGCAATT TCGAGGTGCTGGTCGTCAAGGACGGCGCGCGCGCCGCGCCCAATCCGGGTGAAACCTTCGGCACGGACCAGTCGGCGGAG ACCGTGGGCAAATTGCTGGAAGACAATTTTCTGCCGAAGGATCAGTTCGTCAATTCCTTCTCGCCGGTTCTCATCAATAC CGGCTCCGATCTCGTGCTGTTTGATACCGGTTTCGGCGAGGCTGGCCGCGGTGCCGGTAATGGCCGCCTGACCGAAGGCA TGGCTGCGGCCGGTTATACGCCCGAGGACGTGACCGTGGTGGTGCTGACCCATATGCACGGCGACCATATTGGCGGCCTC ATGGAAAAGGGTGCACCGGCTTTTTCGAAAGCGCGTTACGTGTTCGGCCAAGCGGAATATGATTTCTGGACGGATGAGAA GCGCGCAGGCACCCCTGCCGAAGGTGGGCAGAAGGGCGTTCTCGCCAATGTCAAACCGCTGGCGGAAAAGGCGACCTTCA TTGGTGACGGCGCCAATGTCGTCTCCGGCATCACCGGCATCGCAGCCTTTGGCCACTCGCCCGGACATATGATCTTCCGT GTCGAATCGGAAGGCAAACAGCTGATCCTGACGGCAGATACCGCCAACCATTTCGTCCTGTCGCTGCAGAAGCCGGACTG GGAGGTGAAATTCGACATGGACAAGGCGGCGGCCGCTGCGACCCGCAAGAAGGTCTATGACATGATCGCCACCGACCGGT TGCCATTCCTCGGCTATCACATGCCTTTCCCTTCTGTCGGTTACGCGGAGAAGCTGGATACGGGTTACCGTTTCGTGCCG AAGTCCTACCAGTTCGACATCTGA
Upstream 100 bases:
>100_bases TCTTGCAACTTTCTCGCTCTATTGTCCGTTGGGTGAGTTCAGTTGGCGATCATGGCCAGTTGGCGATATCGGGAGAAAGA TAATGACCCAATCCTTGAGC
Downstream 100 bases:
>100_bases TCTCTGCTGCAATGCAGCAACAGCGAAAGCCCGGAAGGTCATTCCGGGTTTTTTCTATTCCCTTCCTGTCATGAACGTGT TACCAGCCCTCGCCAACTTC
Product: metallo-beta-lactamase superfamily protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Twin-Arginine Translocation Pathway Signal; Zn-Dependent Hydrolase; Beta-Lactamase-Like Protein; Beta-Lactamase; Metallo-Beta-Lactamase; Metal Dependent Hydrolase; Hydrolase; Methyl Parathion Hydrolase; Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Hydrolase; Metallo-Beta-Lactamase Superfamily; Metallo-Hydrolase Protein; Glyoxalase II; Zn-Dependent Beta-Lactamase Domain Hydrolase; Beta-Lactamase/Hydrolase; Metal-Dependent Hydrolase; Organophosphate Pesticide Hydrolase; Signal Peptide; Beta-Lactamase-Like Zn-Dependent Hydrolase Protein; Metallo-Beta-Lactamase Domain-Containing Protein; GloB Protein; Aldehyde Dehydrogenase; Metallo-Beta-Lactamase Family Methyl Parathion Hydrolase; Signal Peptide Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein; Metall Dependent Hydrolase; Zn-Dependent Hydrolase Including Glyoxylase
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSRRGLIGAAGASVLGAPLLMARGANAQTNQPQTSMEIKHAMPPETNRFKLGNFEVLVVKDGARAAPNPGETFGTDQSAE TVGKLLEDNFLPKDQFVNSFSPVLINTGSDLVLFDTGFGEAGRGAGNGRLTEGMAAAGYTPEDVTVVVLTHMHGDHIGGL MEKGAPAFSKARYVFGQAEYDFWTDEKRAGTPAEGGQKGVLANVKPLAEKATFIGDGANVVSGITGIAAFGHSPGHMIFR VESEGKQLILTADTANHFVLSLQKPDWEVKFDMDKAAAAATRKKVYDMIATDRLPFLGYHMPFPSVGYAEKLDTGYRFVP KSYQFDI
Sequences:
>Translated_327_residues MSRRGLIGAAGASVLGAPLLMARGANAQTNQPQTSMEIKHAMPPETNRFKLGNFEVLVVKDGARAAPNPGETFGTDQSAE TVGKLLEDNFLPKDQFVNSFSPVLINTGSDLVLFDTGFGEAGRGAGNGRLTEGMAAAGYTPEDVTVVVLTHMHGDHIGGL MEKGAPAFSKARYVFGQAEYDFWTDEKRAGTPAEGGQKGVLANVKPLAEKATFIGDGANVVSGITGIAAFGHSPGHMIFR VESEGKQLILTADTANHFVLSLQKPDWEVKFDMDKAAAAATRKKVYDMIATDRLPFLGYHMPFPSVGYAEKLDTGYRFVP KSYQFDI >Mature_326_residues SRRGLIGAAGASVLGAPLLMARGANAQTNQPQTSMEIKHAMPPETNRFKLGNFEVLVVKDGARAAPNPGETFGTDQSAET VGKLLEDNFLPKDQFVNSFSPVLINTGSDLVLFDTGFGEAGRGAGNGRLTEGMAAAGYTPEDVTVVVLTHMHGDHIGGLM EKGAPAFSKARYVFGQAEYDFWTDEKRAGTPAEGGQKGVLANVKPLAEKATFIGDGANVVSGITGIAAFGHSPGHMIFRV ESEGKQLILTADTANHFVLSLQKPDWEVKFDMDKAAAAATRKKVYDMIATDRLPFLGYHMPFPSVGYAEKLDTGYRFVPK SYQFDI
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35007; Mature: 34876
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRGLIGAAGASVLGAPLLMARGANAQTNQPQTSMEIKHAMPPETNRFKLGNFEVLVVK CCCCCCEECCCHHHHHCHHHEECCCCCCCCCCCCCEEEEECCCCCCCEEEECCEEEEEEE DGARAAPNPGETFGTDQSAETVGKLLEDNFLPKDQFVNSFSPVLINTGSDLVLFDTGFGE CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCEEEEECCCCC AGRGAGNGRLTEGMAAAGYTPEDVTVVVLTHMHGDHIGGLMEKGAPAFSKARYVFGQAEY CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCHHHCEEEEECCCC DFWTDEKRAGTPAEGGQKGVLANVKPLAEKATFIGDGANVVSGITGIAAFGHSPGHMIFR CCCCCCCCCCCCCCCCCCCEEECCHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCEEEEE VESEGKQLILTADTANHFVLSLQKPDWEVKFDMDKAAAAATRKKVYDMIATDRLPFLGYH EECCCCEEEEEECCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEE MPFPSVGYAEKLDTGYRFVPKSYQFDI CCCCCCCCHHHHCCCCEECCCCCCCCC >Mature Secondary Structure SRRGLIGAAGASVLGAPLLMARGANAQTNQPQTSMEIKHAMPPETNRFKLGNFEVLVVK CCCCCEECCCHHHHHCHHHEECCCCCCCCCCCCCEEEEECCCCCCCEEEECCEEEEEEE DGARAAPNPGETFGTDQSAETVGKLLEDNFLPKDQFVNSFSPVLINTGSDLVLFDTGFGE CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCEEEEECCCCC AGRGAGNGRLTEGMAAAGYTPEDVTVVVLTHMHGDHIGGLMEKGAPAFSKARYVFGQAEY CCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCHHHCEEEEECCCC DFWTDEKRAGTPAEGGQKGVLANVKPLAEKATFIGDGANVVSGITGIAAFGHSPGHMIFR CCCCCCCCCCCCCCCCCCCEEECCHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCEEEEE VESEGKQLILTADTANHFVLSLQKPDWEVKFDMDKAAAAATRKKVYDMIATDRLPFLGYH EECCCCEEEEEECCCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEE MPFPSVGYAEKLDTGYRFVPKSYQFDI CCCCCCCCHHHHCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA