Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is fbpB2 [H]
Identifier: 159184389
GI number: 159184389
Start: 600771
End: 602351
Strand: Reverse
Name: fbpB2 [H]
Synonym: Atu0613
Alternate gene names: 159184389
Gene position: 602351-600771 (Counterclockwise)
Preceding gene: 15887959
Following gene: 159184387
Centisome position: 21.2
GC content: 60.91
Gene sequence:
>1581_bases ATGCCCATTCTGGCGATCTTCTGGCTGGCCCTGACCGGCAGCACGGAGGGGTGGCAACATCTTCTTGCCAATGTTCTGCC ACGCGCCGGGTTCCGCACCTTCATATTGCTGGGACTGACGGCCGCGACAACGGCCTTCTTCGGGATCGTCTGCGCCTGGC TCGTCACCACCTTCGAATTTCCGTTGCGGCGGATATTGTCCGCGGCTCTTGTGCTGCCGCTCGCCATTCCGTCCTATCTG GCGGCCTATGCGTTTGGCGAGTTTCTCGATTTCACCGGGCCGGTGCAGAGTGCCGTTCGCGCCGCCTTCGGTTACCACAG CATTCGTGACTACTGGTTTCCCGACATCCGCTCGCTCGGCGGTGCGGTGATCGTCCTGAGTTCGGTGCTTTACCCTTATG TCTATCTTTCGGCCCGCGCCGCTCTTTCCATGCAGGGGCGGTTTGCGGCCGAAGCGGCCCGCACGCTCGGTGCAAAGCCG TTGAATGTGTTCTTCTCCGTGCAATTGCCGATGGCGCGGCCGGCCATCGCCATCGGGCTGTCGCTGGTCTTGATGGAGAC ACTGAACGATATTGGCGCCGTGGAATATCTCGGCGTCCAGACGCTCACCTTCACCATCTACGAGACCTGGCTCAATCGCG GCAATCTTGCCAATGCGACCCAGATCGCCGCCGTCATCCTCATCATTGTCAGTGCCCTGATCGTCATTGAGCGCAATGCC CGGGAAAAACAGCGCTTTGGCGCGCCGAAAGCGACGAGCATGGCCCAGCGCCACCGCTTGAAGGCGCTGGCCGGCTGGCG GCGCTGGTGCGCAAGCCTGTTCTGCTTCCTGCCCGTGGCGAGCGGCTTTTTCATCCCGGTCATCGTGCTTGGCGGTTATG CCGCGAAAAGGCTGGATGCGCTGTTTCAACCGAAGCTTTTGAAAGCGCTCGGGCACAGCCTCGAAGTCTCGCTTTCCGCT GCCTTCCTGACACTGATTGCGGCTTTCGTGTTCTCCTATGCCATCCGCACCGAGCGCTCGCGCCTCTCAAAAGTGGCGGC GCGTCTCGGCTCCATGGGTTATGGAGTGCCGGGAACCGTGCTTGCCATCGGCGTCCTCATTCCGCTGGCAAGTCTCGATA ATGGCGTTGACGGGTTCATCCGTTCCCATTTCGGCTTTTCCAGCGGGCTGCTTCTATCCGGCACCGCCTTTGCCATCATC TATGCCCATGCCGTGCGTTTCATGACCATGGCGGAAGGCACGCTCGATGCCGGTTTCCATAAGCTCTCGCCGCATATCGA CATGGCCTCACGCAGCCTTGGACGCAACCGGGCGCAGACGCTGTTCAAGGTGCTTTTGCCGAATATGCGGCCGGCGGCGC TCACCGCCTTTCTTCTGGTCCTGATCGAATCCATGAAGGAGTTGCCGGCCACCATCCTGCTGCGGCCCTTCGGTTTCAAC ACGCTCGCCACGCTGGTTTATGAGGATGCGTCCCGCTCCAGGGTGCAGGATGCCGCCGTGCCGGCGATCATCATCATCAT GGCCGGGCTTATTCCCGTGCTGCTCGTCTCGAAATCGATGGATCATCCGGAACATCACTGA
Upstream 100 bases:
>100_bases AAGACAGCAGGCCCGCATGCCCATGACCGTTTCCCCTCCAGCGACAAGGCGCGTTTCAGTGCTGCCGATGACGGCAGTCG TTATCGCGGCCATTGCCGCC
Downstream 100 bases:
>100_bases GGCATCGGCGGCATCAGCAAAAAGAAAGGCGGCCTTACGGCCGCCTGTATGAGTTGTGCTTTTCAACGAGAGAAAGGGGG GACAATCTCGCCACTTGGAA
Product: ABC transporter, membrane spanning protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MPILAIFWLALTGSTEGWQHLLANVLPRAGFRTFILLGLTAATTAFFGIVCAWLVTTFEFPLRRILSAALVLPLAIPSYL AAYAFGEFLDFTGPVQSAVRAAFGYHSIRDYWFPDIRSLGGAVIVLSSVLYPYVYLSARAALSMQGRFAAEAARTLGAKP LNVFFSVQLPMARPAIAIGLSLVLMETLNDIGAVEYLGVQTLTFTIYETWLNRGNLANATQIAAVILIIVSALIVIERNA REKQRFGAPKATSMAQRHRLKALAGWRRWCASLFCFLPVASGFFIPVIVLGGYAAKRLDALFQPKLLKALGHSLEVSLSA AFLTLIAAFVFSYAIRTERSRLSKVAARLGSMGYGVPGTVLAIGVLIPLASLDNGVDGFIRSHFGFSSGLLLSGTAFAII YAHAVRFMTMAEGTLDAGFHKLSPHIDMASRSLGRNRAQTLFKVLLPNMRPAALTAFLLVLIESMKELPATILLRPFGFN TLATLVYEDASRSRVQDAAVPAIIIIMAGLIPVLLVSKSMDHPEHH
Sequences:
>Translated_526_residues MPILAIFWLALTGSTEGWQHLLANVLPRAGFRTFILLGLTAATTAFFGIVCAWLVTTFEFPLRRILSAALVLPLAIPSYL AAYAFGEFLDFTGPVQSAVRAAFGYHSIRDYWFPDIRSLGGAVIVLSSVLYPYVYLSARAALSMQGRFAAEAARTLGAKP LNVFFSVQLPMARPAIAIGLSLVLMETLNDIGAVEYLGVQTLTFTIYETWLNRGNLANATQIAAVILIIVSALIVIERNA REKQRFGAPKATSMAQRHRLKALAGWRRWCASLFCFLPVASGFFIPVIVLGGYAAKRLDALFQPKLLKALGHSLEVSLSA AFLTLIAAFVFSYAIRTERSRLSKVAARLGSMGYGVPGTVLAIGVLIPLASLDNGVDGFIRSHFGFSSGLLLSGTAFAII YAHAVRFMTMAEGTLDAGFHKLSPHIDMASRSLGRNRAQTLFKVLLPNMRPAALTAFLLVLIESMKELPATILLRPFGFN TLATLVYEDASRSRVQDAAVPAIIIIMAGLIPVLLVSKSMDHPEHH >Mature_525_residues PILAIFWLALTGSTEGWQHLLANVLPRAGFRTFILLGLTAATTAFFGIVCAWLVTTFEFPLRRILSAALVLPLAIPSYLA AYAFGEFLDFTGPVQSAVRAAFGYHSIRDYWFPDIRSLGGAVIVLSSVLYPYVYLSARAALSMQGRFAAEAARTLGAKPL NVFFSVQLPMARPAIAIGLSLVLMETLNDIGAVEYLGVQTLTFTIYETWLNRGNLANATQIAAVILIIVSALIVIERNAR EKQRFGAPKATSMAQRHRLKALAGWRRWCASLFCFLPVASGFFIPVIVLGGYAAKRLDALFQPKLLKALGHSLEVSLSAA FLTLIAAFVFSYAIRTERSRLSKVAARLGSMGYGVPGTVLAIGVLIPLASLDNGVDGFIRSHFGFSSGLLLSGTAFAIIY AHAVRFMTMAEGTLDAGFHKLSPHIDMASRSLGRNRAQTLFKVLLPNMRPAALTAFLLVLIESMKELPATILLRPFGFNT LATLVYEDASRSRVQDAAVPAIIIIMAGLIPVLLVSKSMDHPEHH
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 57092; Mature: 56961
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILAIFWLALTGSTEGWQHLLANVLPRAGFRTFILLGLTAATTAFFGIVCAWLVTTFEF CCHHHEEHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLRRILSAALVLPLAIPSYLAAYAFGEFLDFTGPVQSAVRAAFGYHSIRDYWFPDIRSLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHC GAVIVLSSVLYPYVYLSARAALSMQGRFAAEAARTLGAKPLNVFFSVQLPMARPAIAIGL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHH SLVLMETLNDIGAVEYLGVQTLTFTIYETWLNRGNLANATQIAAVILIIVSALIVIERNA HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC REKQRFGAPKATSMAQRHRLKALAGWRRWCASLFCFLPVASGFFIPVIVLGGYAAKRLDA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHH LFQPKLLKALGHSLEVSLSAAFLTLIAAFVFSYAIRTERSRLSKVAARLGSMGYGVPGTV HHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LAIGVLIPLASLDNGVDGFIRSHFGFSSGLLLSGTAFAIIYAHAVRFMTMAEGTLDAGFH HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCHH KLSPHIDMASRSLGRNRAQTLFKVLLPNMRPAALTAFLLVLIESMKELPATILLRPFGFN HCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHEEECCCCHH TLATLVYEDASRSRVQDAAVPAIIIIMAGLIPVLLVSKSMDHPEHH HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PILAIFWLALTGSTEGWQHLLANVLPRAGFRTFILLGLTAATTAFFGIVCAWLVTTFEF CHHHEEHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLRRILSAALVLPLAIPSYLAAYAFGEFLDFTGPVQSAVRAAFGYHSIRDYWFPDIRSLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHC GAVIVLSSVLYPYVYLSARAALSMQGRFAAEAARTLGAKPLNVFFSVQLPMARPAIAIGL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHH SLVLMETLNDIGAVEYLGVQTLTFTIYETWLNRGNLANATQIAAVILIIVSALIVIERNA HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC REKQRFGAPKATSMAQRHRLKALAGWRRWCASLFCFLPVASGFFIPVIVLGGYAAKRLDA HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHH LFQPKLLKALGHSLEVSLSAAFLTLIAAFVFSYAIRTERSRLSKVAARLGSMGYGVPGTV HHCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LAIGVLIPLASLDNGVDGFIRSHFGFSSGLLLSGTAFAIIYAHAVRFMTMAEGTLDAGFH HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCHH KLSPHIDMASRSLGRNRAQTLFKVLLPNMRPAALTAFLLVLIESMKELPATILLRPFGFN HCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHEEECCCCHH TLATLVYEDASRSRVQDAAVPAIIIIMAGLIPVLLVSKSMDHPEHH HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]