Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184365
Identifier: 159184365
GI number: 159184365
Start: 542045
End: 542449
Strand: Reverse
Name: 159184365
Synonym: Atu0556
Alternate gene names: NA
Gene position: 542449-542045 (Counterclockwise)
Preceding gene: 15887903
Following gene: 159184364
Centisome position: 19.09
GC content: 59.75
Gene sequence:
>405_bases ATGAAGGTGGCGGGCGGCGATCGCACCCGCGATCTGCCTCATACCGGACCGCGGGAAGTCTTCAGTGTCTCGCCCATGGC CATGACCAACCGTAACAAGGAAGACACCCCGCCAGCGGCGGAGCTGCCCGACATGCTGACGACGGCGACCGTCAACGCTG GCGGCAAGGAGAGACAGAACAATGTGGCAGCCGGGATCGAAGACCAGCCCTTCCCCGGCCAGACATCGTTCCGTCTGCTA CATGTCTCCAATGGCCGCGCCCTGATCGAAGACAGTTCGGGCATGTATATGGTGCGGGTCGGTTCCACATTGCCTGACAA TGCCTTGCTGACGAAGATCGAGCAGCGCAATGGCGAATGGCTGATCGAGACATCCTCCGGAAAAACCTATCATCCGGAAA AATGA
Upstream 100 bases:
>100_bases CTTTACGCCCGACCGCATTCTCGCATGGACGGGCATCGCGCTTGCCGCTGCAGCAGCCTTTTTCCCCTGGTACGTCTTCT TCAACGAGGAGAAATTCGGC
Downstream 100 bases:
>100_bases GAGAATTTCTCCCCGCTAAAAAGGCGCGCCACACATCCGGCGCGCTTTTTTGTTTGTGAGGGACACGCAAGCAATGCGTC TGTTTCCATTGTTCCACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKVAGGDRTRDLPHTGPREVFSVSPMAMTNRNKEDTPPAAELPDMLTTATVNAGGKERQNNVAAGIEDQPFPGQTSFRLL HVSNGRALIEDSSGMYMVRVGSTLPDNALLTKIEQRNGEWLIETSSGKTYHPEK
Sequences:
>Translated_134_residues MKVAGGDRTRDLPHTGPREVFSVSPMAMTNRNKEDTPPAAELPDMLTTATVNAGGKERQNNVAAGIEDQPFPGQTSFRLL HVSNGRALIEDSSGMYMVRVGSTLPDNALLTKIEQRNGEWLIETSSGKTYHPEK >Mature_134_residues MKVAGGDRTRDLPHTGPREVFSVSPMAMTNRNKEDTPPAAELPDMLTTATVNAGGKERQNNVAAGIEDQPFPGQTSFRLL HVSNGRALIEDSSGMYMVRVGSTLPDNALLTKIEQRNGEWLIETSSGKTYHPEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14609; Mature: 14609
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAGGDRTRDLPHTGPREVFSVSPMAMTNRNKEDTPPAAELPDMLTTATVNAGGKERQN CCCCCCCCCCCCCCCCCCCEEEECCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC NVAAGIEDQPFPGQTSFRLLHVSNGRALIEDSSGMYMVRVGSTLPDNALLTKIEQRNGEW CEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEEECCCCCCHHHHHHEECCCCCE LIETSSGKTYHPEK EEECCCCCEECCCC >Mature Secondary Structure MKVAGGDRTRDLPHTGPREVFSVSPMAMTNRNKEDTPPAAELPDMLTTATVNAGGKERQN CCCCCCCCCCCCCCCCCCCEEEECCCEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCC NVAAGIEDQPFPGQTSFRLLHVSNGRALIEDSSGMYMVRVGSTLPDNALLTKIEQRNGEW CEECCCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEEECCCCCCHHHHHHEECCCCCE LIETSSGKTYHPEK EEECCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA