Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184322
Identifier: 159184322
GI number: 159184322
Start: 460159
End: 460419
Strand: Direct
Name: 159184322
Synonym: Atu0470
Alternate gene names: NA
Gene position: 460159-460419 (Clockwise)
Preceding gene: 159184321
Following gene: 159184324
Centisome position: 16.19
GC content: 46.74
Gene sequence:
>261_bases ATGACTCTAATCTTTCCAAATCGCAGTCGAAGTTACGACGACACCAGAAACGCCGTTCGGTTTTTGGGGTATGACGGCAT ACTAGAGGTACGTTTTTTCATTGAGGCTGCCGCACTCGTGCAATCAAGCTCATCGAACATCAGTTCTGAGTGCCTGTTGG CATTCGATGCAGCACGCGGTTCGATTCTCGAAGCGGCAAAAAAAGCTTACGCGCGTGGCTATCAATCTATTTATATGCTG AATGCCAGAGATTTCAGATAA
Upstream 100 bases:
>100_bases CAGCGGATTTCGTCATCGTCCAGATCAGCCCATCTGCCGAATTGATTTCCCAAGGCCGACTGCCACCAGTCGGCTGCACC AGTAGGTAAAAAGCTCAGCC
Downstream 100 bases:
>100_bases ATTGACCTAACGGCGTATCGTTTCGCCCTTTACCATCGTTCCCTTGTTTCAGGTGCTCAAATATTCCTTGTCATGAAAAG GCTCGCGCGCCGGTAAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MTLIFPNRSRSYDDTRNAVRFLGYDGILEVRFFIEAAALVQSSSSNISSECLLAFDAARGSILEAAKKAYARGYQSIYML NARDFR
Sequences:
>Translated_86_residues MTLIFPNRSRSYDDTRNAVRFLGYDGILEVRFFIEAAALVQSSSSNISSECLLAFDAARGSILEAAKKAYARGYQSIYML NARDFR >Mature_85_residues TLIFPNRSRSYDDTRNAVRFLGYDGILEVRFFIEAAALVQSSSSNISSECLLAFDAARGSILEAAKKAYARGYQSIYMLN ARDFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9682; Mature: 9551
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIFPNRSRSYDDTRNAVRFLGYDGILEVRFFIEAAALVQSSSSNISSECLLAFDAARG CEEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCC SILEAAKKAYARGYQSIYMLNARDFR HHHHHHHHHHHCCCCEEEEECCCCCC >Mature Secondary Structure TLIFPNRSRSYDDTRNAVRFLGYDGILEVRFFIEAAALVQSSSSNISSECLLAFDAARG EEECCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCC SILEAAKKAYARGYQSIYMLNARDFR HHHHHHHHHHHCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA