Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159184319
Identifier: 159184319
GI number: 159184319
Start: 458394
End: 458753
Strand: Reverse
Name: 159184319
Synonym: Atu0466
Alternate gene names: NA
Gene position: 458753-458394 (Counterclockwise)
Preceding gene: 159184320
Following gene: 159184318
Centisome position: 16.14
GC content: 50.56
Gene sequence:
>360_bases GTGAAGAGTAATGATCCTTGGCTGCCTAATGTGGCAACCGACAAATTGAGGGCAATAGCCCGAGACCCGAAATTCACCAT CGCCTACAAATTACATGCCAAAGAGCGACTTGCAGAGCGCAACCTTATCGCGTCTGACGTATTGTACGCTTTGAAATACG GGTTCGTCTACGAACAGGCGATCCCGGCGACTAGGCAAGGATTCTTCCGCTATCGCGTCGAGTGCAAAACTCCGAATAGC GGGAGCCGAGCCATAGGCGTTGTTGTTATACCCAACCACGTCGGCTGTTACATGAAGATTGTAACGGTCATGTGGATTGA TGAATTCGAGCGCAGGGACGGCTCGATAATTGGAGAATGA
Upstream 100 bases:
>100_bases CAAAATTTCATAGTCCACTAACGCCCTTGTTAATTGACCATTCATCACTAGATAGGTATCACCATGATACATAAAGCGGT CTAGACCGGTCGGAGGATGT
Downstream 100 bases:
>100_bases AAATGAGTGTTGTTGAGCATCACTACACAGAATGTGGCTTGATGAACGTGTTCATCAGCGGAATCGAGGTCCAGACCGAC GATGACGGCGATGAGGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MKSNDPWLPNVATDKLRAIARDPKFTIAYKLHAKERLAERNLIASDVLYALKYGFVYEQAIPATRQGFFRYRVECKTPNS GSRAIGVVVIPNHVGCYMKIVTVMWIDEFERRDGSIIGE
Sequences:
>Translated_119_residues MKSNDPWLPNVATDKLRAIARDPKFTIAYKLHAKERLAERNLIASDVLYALKYGFVYEQAIPATRQGFFRYRVECKTPNS GSRAIGVVVIPNHVGCYMKIVTVMWIDEFERRDGSIIGE >Mature_119_residues MKSNDPWLPNVATDKLRAIARDPKFTIAYKLHAKERLAERNLIASDVLYALKYGFVYEQAIPATRQGFFRYRVECKTPNS GSRAIGVVVIPNHVGCYMKIVTVMWIDEFERRDGSIIGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13608; Mature: 13608
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSNDPWLPNVATDKLRAIARDPKFTIAYKLHAKERLAERNLIASDVLYALKYGFVYEQA CCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHC IPATRQGFFRYRVECKTPNSGSRAIGVVVIPNHVGCYMKIVTVMWIDEFERRDGSIIGE CCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKSNDPWLPNVATDKLRAIARDPKFTIAYKLHAKERLAERNLIASDVLYALKYGFVYEQA CCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHC IPATRQGFFRYRVECKTPNSGSRAIGVVVIPNHVGCYMKIVTVMWIDEFERRDGSIIGE CCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA