Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184280
Identifier: 159184280
GI number: 159184280
Start: 371302
End: 371898
Strand: Reverse
Name: 159184280
Synonym: Atu0377
Alternate gene names: NA
Gene position: 371898-371302 (Counterclockwise)
Preceding gene: 159184281
Following gene: 159184279
Centisome position: 13.09
GC content: 63.32
Gene sequence:
>597_bases ATGACGATGACCACACGCAAAATCGCCCTCTCTGCTCTTGGCGCAGCCCTTGTGCTCAGCACGGCCGCAACGGCCAGTTT CGCCGCGCCCGGAAAAGGCCACAAGGATCGCATGCCGATCCGGCCGGAAGCGGCTTTCGTGCACCTCTTGAAGGTGGCCG ATACCAATAAGGACGGCAAGATTTCCAAGGAGGAATTCACCGCCCGCCAGGATGCGCTTTTCACCGAGATCGACATGGAC AAGGACGGCTCGATCACGCCGAAGGAAATGCGCGAGTATCGCAAGGCGAAGATGGAAGCTTTCCGAGCCGCCAACCCGCG CCCCGAGCGGGAAGACGCCAAGGCGGATGAGGCCAAGGGCCCCGAGGGCAAACGCGCAGAGCGCGACCACGGAGGCCGTT CCGGCCATCAGGGCTGGGGCAGGCACGGCGGCAAGGGTGGCGGCTTGGGAATGATCCGCTGGGCCGATACCGACGAGAAC GGTCAGGTCAGCAAAGCCGAGTTCACGGCCGCCGGCGAAAAGATGTTCGAGCGGCTCGACCGGAACAAGGACGGCGTTAT TTCCATCGACGATATGCCGGACCGCCCGTTCCTCTGA
Upstream 100 bases:
>100_bases CAGCGAACATTACCGAAGCTTCATGCACCTTACGGATGTTTAAGTGGTGTGCCTTGGTCGACGTCACTATCTTTTCTTCA GGGACACCAAAGAAAAGGTA
Downstream 100 bases:
>100_bases TCCCGCAAATATAAAGCCCGCTCAATCGGCGGGCTTTTTCTTTCAATGGAGACTGACGGTTTTCAGATCGTCTTCCGCCG CCTTGAAAAAGGTACTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MTMTTRKIALSALGAALVLSTAATASFAAPGKGHKDRMPIRPEAAFVHLLKVADTNKDGKISKEEFTARQDALFTEIDMD KDGSITPKEMREYRKAKMEAFRAANPRPEREDAKADEAKGPEGKRAERDHGGRSGHQGWGRHGGKGGGLGMIRWADTDEN GQVSKAEFTAAGEKMFERLDRNKDGVISIDDMPDRPFL
Sequences:
>Translated_198_residues MTMTTRKIALSALGAALVLSTAATASFAAPGKGHKDRMPIRPEAAFVHLLKVADTNKDGKISKEEFTARQDALFTEIDMD KDGSITPKEMREYRKAKMEAFRAANPRPEREDAKADEAKGPEGKRAERDHGGRSGHQGWGRHGGKGGGLGMIRWADTDEN GQVSKAEFTAAGEKMFERLDRNKDGVISIDDMPDRPFL >Mature_197_residues TMTTRKIALSALGAALVLSTAATASFAAPGKGHKDRMPIRPEAAFVHLLKVADTNKDGKISKEEFTARQDALFTEIDMDK DGSITPKEMREYRKAKMEAFRAANPRPEREDAKADEAKGPEGKRAERDHGGRSGHQGWGRHGGKGGGLGMIRWADTDENG QVSKAEFTAAGEKMFERLDRNKDGVISIDDMPDRPFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21685; Mature: 21553
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTTRKIALSALGAALVLSTAATASFAAPGKGHKDRMPIRPEAAFVHLLKVADTNKDGK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC ISKEEFTARQDALFTEIDMDKDGSITPKEMREYRKAKMEAFRAANPRPEREDAKADEAKG CCHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PEGKRAERDHGGRSGHQGWGRHGGKGGGLGMIRWADTDENGQVSKAEFTAAGEKMFERLD CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC RNKDGVISIDDMPDRPFL CCCCCEEEECCCCCCCCC >Mature Secondary Structure TMTTRKIALSALGAALVLSTAATASFAAPGKGHKDRMPIRPEAAFVHLLKVADTNKDGK CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC ISKEEFTARQDALFTEIDMDKDGSITPKEMREYRKAKMEAFRAANPRPEREDAKADEAKG CCHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PEGKRAERDHGGRSGHQGWGRHGGKGGGLGMIRWADTDENGQVSKAEFTAAGEKMFERLD CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHC RNKDGVISIDDMPDRPFL CCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA