Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184233
Identifier: 159184233
GI number: 159184233
Start: 253566
End: 254444
Strand: Direct
Name: 159184233
Synonym: Atu0257
Alternate gene names: NA
Gene position: 253566-254444 (Clockwise)
Preceding gene: 15887606
Following gene: 159184234
Centisome position: 8.92
GC content: 58.13
Gene sequence:
>879_bases ATGCTGGTCAATAAAAGTGAGGTTGTGGAAACGGAAGGTTTTCGCGTTCATCTTGACGACGATGACATCGCAACCGTGAT GCGCGTCCTCCTGAAAAGTGACCGGCGCATTCAGAAGGTCGAGCTTTCGCAGCTGACGGTATGGATCAAACGGCAGGGCA CGGAACGGGTGACCTGGTGGATGAAAATGCAGAAGCTGCTGTCGAAACTTCTGCCCTACACCTTTCTTCGTCCTTCCGAA CCGCTTGACGGTGCGGGCCTCATGCAGCGAGAACTGGAAACATTGCAGCAGTTCCAGCAACGCGGCTTCCCGGTTCCGCC GCTGATCTATTCTTCACGCACGGCGGTGGTGCTGGGAGATGTCGGACCGACGCTCATGGAGCGGATGGATGCGCTGAAGT CGTCCGATCCGGTGGAGCATGATGCCTTGCTTGTGAAATCCGCGGAAGCGCTCGGCGAGCTGCATGCTGCGGGCCTCTGC CACGGCCGCCCGCATGTGCGTGATTTCTTTTTAAAGGACGGCCGTGTCGGTTTCATGGATTTCGAGGAGCGCCCGCAGGA GGTCATGCCGCTTGAAACGGCGCAGGCCCGCGATATCTGGCTGCTGTTTCTGCAGGTCGCGACCCGTGCCTGTGATGCCC CTAAAACCCGCGACGCAGCCTTTTCACGCTGGCTTGAAAACACCCCGCCCCGGGCAGTCGAAGAATTAAGCCGCCTGACC GGCATTCTCGGGCGATTTTTACCGCTTGCCCGGTTGATCGGGCGCGTGCGGATGGGTAGTGATCTGCGACGCTTTATCAT GGCGACCGACTATCTGATGAATGCTGTGAACACCGACGCCGCTGTTAAAAAGTCCGGCAAGGCAGGAAAAGATGACTGA
Upstream 100 bases:
>100_bases TTTGAGCTGCTGATACATTTCCATCGGTGTTTTTTAATTTAGAAATTTAGAAGAGTTGGAGTATTCACGCCGTTTGGAGC GAAACCTTTGGTGGACGAAA
Downstream 100 bases:
>100_bases ACTTGATACCTTGAAATCGCAACTGATGTCGGAGATCGCCGCCGCTGCCGATGAGCCGGCCATCGAGGCCGTGCGCGTCT CCGCGCTCGGCAAGAAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MLVNKSEVVETEGFRVHLDDDDIATVMRVLLKSDRRIQKVELSQLTVWIKRQGTERVTWWMKMQKLLSKLLPYTFLRPSE PLDGAGLMQRELETLQQFQQRGFPVPPLIYSSRTAVVLGDVGPTLMERMDALKSSDPVEHDALLVKSAEALGELHAAGLC HGRPHVRDFFLKDGRVGFMDFEERPQEVMPLETAQARDIWLLFLQVATRACDAPKTRDAAFSRWLENTPPRAVEELSRLT GILGRFLPLARLIGRVRMGSDLRRFIMATDYLMNAVNTDAAVKKSGKAGKDD
Sequences:
>Translated_292_residues MLVNKSEVVETEGFRVHLDDDDIATVMRVLLKSDRRIQKVELSQLTVWIKRQGTERVTWWMKMQKLLSKLLPYTFLRPSE PLDGAGLMQRELETLQQFQQRGFPVPPLIYSSRTAVVLGDVGPTLMERMDALKSSDPVEHDALLVKSAEALGELHAAGLC HGRPHVRDFFLKDGRVGFMDFEERPQEVMPLETAQARDIWLLFLQVATRACDAPKTRDAAFSRWLENTPPRAVEELSRLT GILGRFLPLARLIGRVRMGSDLRRFIMATDYLMNAVNTDAAVKKSGKAGKDD >Mature_292_residues MLVNKSEVVETEGFRVHLDDDDIATVMRVLLKSDRRIQKVELSQLTVWIKRQGTERVTWWMKMQKLLSKLLPYTFLRPSE PLDGAGLMQRELETLQQFQQRGFPVPPLIYSSRTAVVLGDVGPTLMERMDALKSSDPVEHDALLVKSAEALGELHAAGLC HGRPHVRDFFLKDGRVGFMDFEERPQEVMPLETAQARDIWLLFLQVATRACDAPKTRDAAFSRWLENTPPRAVEELSRLT GILGRFLPLARLIGRVRMGSDLRRFIMATDYLMNAVNTDAAVKKSGKAGKDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33116; Mature: 33116
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVNKSEVVETEGFRVHLDDDDIATVMRVLLKSDRRIQKVELSQLTVWIKRQGTERVTWW CCCCCHHHEECCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHH MKMQKLLSKLLPYTFLRPSEPLDGAGLMQRELETLQQFQQRGFPVPPLIYSSRTAVVLGD HHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEECC VGPTLMERMDALKSSDPVEHDALLVKSAEALGELHAAGLCHGRPHVRDFFLKDGRVGFMD CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC FEERPQEVMPLETAQARDIWLLFLQVATRACDAPKTRDAAFSRWLENTPPRAVEELSRLT HHHCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH GILGRFLPLARLIGRVRMGSDLRRFIMATDYLMNAVNTDAAVKKSGKAGKDD HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCC >Mature Secondary Structure MLVNKSEVVETEGFRVHLDDDDIATVMRVLLKSDRRIQKVELSQLTVWIKRQGTERVTWW CCCCCHHHEECCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHH MKMQKLLSKLLPYTFLRPSEPLDGAGLMQRELETLQQFQQRGFPVPPLIYSSRTAVVLGD HHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEECC VGPTLMERMDALKSSDPVEHDALLVKSAEALGELHAAGLCHGRPHVRDFFLKDGRVGFMD CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCC FEERPQEVMPLETAQARDIWLLFLQVATRACDAPKTRDAAFSRWLENTPPRAVEELSRLT HHHCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH GILGRFLPLARLIGRVRMGSDLRRFIMATDYLMNAVNTDAAVKKSGKAGKDD HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA