Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 159184220
Identifier: 159184220
GI number: 159184220
Start: 230262
End: 230645
Strand: Direct
Name: 159184220
Synonym: Atu0226
Alternate gene names: NA
Gene position: 230262-230645 (Clockwise)
Preceding gene: 159184214
Following gene: 159184221
Centisome position: 8.1
GC content: 58.07
Gene sequence:
>384_bases ATGGTCGGCTTGTCCGTCTTCCTCGGGGCTGCGGCGCAGCCGGTTTTTGCCCAGGACGATATATTGCGCGTTTCGATGAA TCACGCCCGCGTTCTCCGCCTCGACCGTCCCGTGAGCAAGGTTATCGTCGGAAACTCCAAGGTCGCTGATGCCACGGTCG CTGATGCAACGACCATCGTTCTAACCGGGCGCAGTTTTGGCACGACCAATCTTGTGCTTCTTGATGCCGAAGGCAATCCC ATCGTGGATGAGCGCATTCTCGTCTCCATCGACGAGGGTAATACGGTTCGTGTATTCCGCCAGACGGAGCGCACGGTGCT GTCCTGTACGCCGAATTGCGAACAGCATTCGCAAAATAGCGGCGACAAGGACGCTCAGCCCTGA
Upstream 100 bases:
>100_bases AACGCTTCATTCACTAAAACCGCGCATTCTGTGGCGCAATAAACTGTGCTGATAGTAAGCAAGGGCCAAACGCGTGTCAT CCGGAAAACTGGCGAAAATC
Downstream 100 bases:
>100_bases CAGGGCACTTTTTGCATCATTCTGACATGATAGCAGGCCTTCCGATGGAAACGGAAGTCGCTCGTCTTCAGCTTTTCTGA ACTTGAAAAAGACGAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MVGLSVFLGAAAQPVFAQDDILRVSMNHARVLRLDRPVSKVIVGNSKVADATVADATTIVLTGRSFGTTNLVLLDAEGNP IVDERILVSIDEGNTVRVFRQTERTVLSCTPNCEQHSQNSGDKDAQP
Sequences:
>Translated_127_residues MVGLSVFLGAAAQPVFAQDDILRVSMNHARVLRLDRPVSKVIVGNSKVADATVADATTIVLTGRSFGTTNLVLLDAEGNP IVDERILVSIDEGNTVRVFRQTERTVLSCTPNCEQHSQNSGDKDAQP >Mature_127_residues MVGLSVFLGAAAQPVFAQDDILRVSMNHARVLRLDRPVSKVIVGNSKVADATVADATTIVLTGRSFGTTNLVLLDAEGNP IVDERILVSIDEGNTVRVFRQTERTVLSCTPNCEQHSQNSGDKDAQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13632; Mature: 13632
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGLSVFLGAAAQPVFAQDDILRVSMNHARVLRLDRPVSKVIVGNSKVADATVADATTIV CCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCEEECCEEEEE LTGRSFGTTNLVLLDAEGNPIVDERILVSIDEGNTVRVFRQTERTVLSCTPNCEQHSQNS EECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCHHCCCCC GDKDAQP CCCCCCC >Mature Secondary Structure MVGLSVFLGAAAQPVFAQDDILRVSMNHARVLRLDRPVSKVIVGNSKVADATVADATTIV CCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCEEECCEEEEE LTGRSFGTTNLVLLDAEGNPIVDERILVSIDEGNTVRVFRQTERTVLSCTPNCEQHSQNS EECCCCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEECCCCHHCCCCC GDKDAQP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA