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The map label for this gene is erfK [C]

Identifier: 159046595

GI number: 159046595

Start: 117396

End: 117956

Strand: Direct

Name: erfK [C]

Synonym: Dshi_4057

Alternate gene names: 159046595

Gene position: 117396-117956 (Clockwise)

Preceding gene: 159046592

Following gene: 159046596

Centisome position: 92.95

GC content: 56.86

Gene sequence:

>561_bases
ATGACGACATCGCGAAACAACAAGATCAATCGACGAAGCCTGTTGGGGTATGCGGCTGTCGCTTTGGTTGCACCAAGCGT
GGTTCGAGCCGAAACCATTCGCCGCAACATTTCTTCTTTCCGAGTTCATGACTGGCAAGACCATTTCGACACGCTCGGCA
AAGGGATCATCATCTCAGACACCGTGACGATGGCGCTACAGCACTGGACAGCGGACGGCGAGATGCGGATTTACCCGACA
TCCGTTCCGCTGACCGACGAACTCACCAAACGCGGTTACACTGAAGTGGTGGAAAAACGCAAAAACCCCAGTTGGGCGCC
GACGCCCTCCATGCGGGAACGCAATCCGGAATGGCCGGCACGTATCGAGGGGGGTGATCCGGACAACCCCTTGGGTACTC
GCGCACTGTACCTGTCGTGGCAGTACTACCGTATTCACGGGACACAGGACACGCGCAAGATCGGCCGCCGGTCGTCAAAC
GGCTGCATCGGTTTGTTCAACGAACAGATCGAGGAAGTCTACGAGCGAGCGCCTGTCGGCACTCAAGTCAAACTCATCTG
A

Upstream 100 bases:

>100_bases
TCAAGGATACAAATGGATACACTTCTCGCGGCCTTGTCAGGTTGCCTGATGCCGGGTCTCCCGTAAAAGACATGTACAAA
CCGTAGGCTAGGAGTGTGTC

Downstream 100 bases:

>100_bases
CCCAACGGGCAAGGCGGAAGATACAGGCATGGACAAATTAACTGCGCTGATTGGTGCCGTTTTTGTTATCGGCGGGGGTT
TTGCCGTTTGGCAGTTCGTT

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTTSRNNKINRRSLLGYAAVALVAPSVVRAETIRRNISSFRVHDWQDHFDTLGKGIIISDTVTMALQHWTADGEMRIYPT
SVPLTDELTKRGYTEVVEKRKNPSWAPTPSMRERNPEWPARIEGGDPDNPLGTRALYLSWQYYRIHGTQDTRKIGRRSSN
GCIGLFNEQIEEVYERAPVGTQVKLI

Sequences:

>Translated_186_residues
MTTSRNNKINRRSLLGYAAVALVAPSVVRAETIRRNISSFRVHDWQDHFDTLGKGIIISDTVTMALQHWTADGEMRIYPT
SVPLTDELTKRGYTEVVEKRKNPSWAPTPSMRERNPEWPARIEGGDPDNPLGTRALYLSWQYYRIHGTQDTRKIGRRSSN
GCIGLFNEQIEEVYERAPVGTQVKLI
>Mature_185_residues
TTSRNNKINRRSLLGYAAVALVAPSVVRAETIRRNISSFRVHDWQDHFDTLGKGIIISDTVTMALQHWTADGEMRIYPTS
VPLTDELTKRGYTEVVEKRKNPSWAPTPSMRERNPEWPARIEGGDPDNPLGTRALYLSWQYYRIHGTQDTRKIGRRSSNG
CIGLFNEQIEEVYERAPVGTQVKLI

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=143, Percent_Identity=36.3636363636364, Blast_Score=86, Evalue=1e-18,
Organism=Escherichia coli, GI1787040, Length=142, Percent_Identity=35.2112676056338, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787356, Length=141, Percent_Identity=32.6241134751773, Blast_Score=68, Evalue=3e-13,
Organism=Escherichia coli, GI1787968, Length=143, Percent_Identity=32.1678321678322, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311
- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 21228; Mature: 21097

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSRNNKINRRSLLGYAAVALVAPSVVRAETIRRNISSFRVHDWQDHFDTLGKGIIISD
CCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEH
TVTMALQHWTADGEMRIYPTSVPLTDELTKRGYTEVVEKRKNPSWAPTPSMRERNPEWPA
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCHHHHHHHCCCCCCCCCCCHHHCCCCCCC
RIEGGDPDNPLGTRALYLSWQYYRIHGTQDTRKIGRRSSNGCIGLFNEQIEEVYERAPVG
EECCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCC
TQVKLI
CEEEEC
>Mature Secondary Structure 
TTSRNNKINRRSLLGYAAVALVAPSVVRAETIRRNISSFRVHDWQDHFDTLGKGIIISD
CCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEH
TVTMALQHWTADGEMRIYPTSVPLTDELTKRGYTEVVEKRKNPSWAPTPSMRERNPEWPA
HHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCHHHHHHHCCCCCCCCCCCHHHCCCCCCC
RIEGGDPDNPLGTRALYLSWQYYRIHGTQDTRKIGRRSSNGCIGLFNEQIEEVYERAPVG
EECCCCCCCCCCCEEEEEEEEEEEEECCCHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCC
TQVKLI
CEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6209404 [H]