Click here to switch to the map view.

The map label for this gene is imuB [H]

Identifier: 159046535

GI number: 159046535

Start: 58778

End: 60277

Strand: Direct

Name: imuB [H]

Synonym: Dshi_3997

Alternate gene names: 159046535

Gene position: 58778-60277 (Clockwise)

Preceding gene: 159046534

Following gene: 159046536

Centisome position: 46.54

GC content: 69.4

Gene sequence:

>1500_bases
ATGGCAAGACGGCTGCTGTCCATCCGGTTTCCGCGGCTGGCAAGCGACACGAGTCTGCGGAGACGTCCCGTTGAGGGACC
GTTCGCCCTGATCCACAGGTCAGGGAATGCCGAACATGTGCATTGTCTGAACCAGGCCGCCGAGATGCGCGGATTGCATC
CCGGCATGGCGGCGGCCGATGCCCGCGCCATCTGCCCTGAGTTGATCACGCGACCGGCCGATCTTGCACGGGAAGCGGCG
GCACTGGCAGGCCTCAGACGGTGGGCAGGGCGTTATTCCCCGATGGTGGCGCGGGACGGCCCGGGCGGGCTTATCGCCGA
TATCTCCGGCGTGCCACATCTCTTCGGCGGCGAGGCCGAAATGCGGGGCGACCTTCATGCGCGGCTGGAACGGGTCGGCC
TGACTCTCTCGAGCGCCATCGCCGAAACCCGTGGCGCAGCCCAGGCGCTCGCCCGCCATGGCGGCGGCATCCTGCCAGAG
GGCGCGGCGAAGGAGGGTATCGCGCGCCTGCCCGTCTCGGCGTTGAGGATCGGTAGCGATGTGGCCGAGGGACTCGCCCG
GATGGGGCTGAACAGGATCGGCGATCTCACCGATCTGCCGCGGGCGCCGCTCGCGCGTCGGTTCGGCCCGGGGCTCGTGC
TGCGGCTCGATCAGGCGCTCGGCCTTCAGCCTGAGCCGGTCTCCCCGGAGGCGGACGCGCCGTATTTCGGGGTGCGGATG
ACGATGCCGGACCCCATCGGTCTTGAGGCCGATGTCATGTCGGGCCTTGCACGCCTGCTCGACCGGCTGTGCAGCACACT
GGCCCAACATCATCGTGGCGCACGGCGGCTGCGGCTCGAACTGCACCGGGTCGACCGGGAGACCGCGCAGGTCGAGATTG
GGCTGGCCCGGCCGATGCGCGATCCCGAGCGCATTGCGGCCCTCTTCAAGAAAGGCGTATCGGAGGTCGAAGCCGGGTTC
GGGATCGAGGCGATGCGCCTCGTCGCCCATGTGACCGAGGACTTGCCACCCGAGCAGATCGGCGGACCCCGAACGATAGC
CCGCGAGGACGCGCTGGCCGACCTCTTCTCCCGGCTCGGCAACCGGCTGGGCTTCGACCGGGTCCTGCGGCTCCTGCCTG
CCACCAGCAAGATCCCCGAGCGGAGTTTTCTCGTGACACCCGCCGCCTACAGCGCGGCGGAACCTCCGCCACCGCATCGT
GGACCGGATCGGCCGATCATCATCTTTCCGTCTGAGCCGGTCACCACGAAGGGGCTGGGCCAGCCCGGACATCCTCCAGC
CCGGTTCGCCTGGCGGCGCATGTCTTTCACTACCCTGCGTGCGGACGGGCCGGAGCGGATCGCGCCGGAATGGTGGTTCG
ACGATCCGGCCTGGCGCTCGGGTCTGCGCGATTACTGGCGGGTGGAGACCCGCGAGGGCGCACGGCTCTGGCTCTACCAC
ACGCCACAGGCGCCGGCCTGGCCCGCGCAGAGCTGGTTCGCGCAGGGAGAGTTCGCATGA

Upstream 100 bases:

>100_bases
TGCGCACCGAATGCGTCGGAACGACGGGACTCGACTCTGCATCAATGGGCCCTTAGTAAGAACAAAAAGGGAACATTGAG
AACCTGGACTGTGCATTGGA

Downstream 100 bases:

>100_bases
CCGGTTATGCGGAGCTCTGCGTGACGAGCAATTTCACCTTCCTGACCGGCGCCTCGCATCCTGAGGAGCTGGTCACGCGG
GCTGCCGAACTGGGTCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MARRLLSIRFPRLASDTSLRRRPVEGPFALIHRSGNAEHVHCLNQAAEMRGLHPGMAAADARAICPELITRPADLAREAA
ALAGLRRWAGRYSPMVARDGPGGLIADISGVPHLFGGEAEMRGDLHARLERVGLTLSSAIAETRGAAQALARHGGGILPE
GAAKEGIARLPVSALRIGSDVAEGLARMGLNRIGDLTDLPRAPLARRFGPGLVLRLDQALGLQPEPVSPEADAPYFGVRM
TMPDPIGLEADVMSGLARLLDRLCSTLAQHHRGARRLRLELHRVDRETAQVEIGLARPMRDPERIAALFKKGVSEVEAGF
GIEAMRLVAHVTEDLPPEQIGGPRTIAREDALADLFSRLGNRLGFDRVLRLLPATSKIPERSFLVTPAAYSAAEPPPPHR
GPDRPIIIFPSEPVTTKGLGQPGHPPARFAWRRMSFTTLRADGPERIAPEWWFDDPAWRSGLRDYWRVETREGARLWLYH
TPQAPAWPAQSWFAQGEFA

Sequences:

>Translated_499_residues
MARRLLSIRFPRLASDTSLRRRPVEGPFALIHRSGNAEHVHCLNQAAEMRGLHPGMAAADARAICPELITRPADLAREAA
ALAGLRRWAGRYSPMVARDGPGGLIADISGVPHLFGGEAEMRGDLHARLERVGLTLSSAIAETRGAAQALARHGGGILPE
GAAKEGIARLPVSALRIGSDVAEGLARMGLNRIGDLTDLPRAPLARRFGPGLVLRLDQALGLQPEPVSPEADAPYFGVRM
TMPDPIGLEADVMSGLARLLDRLCSTLAQHHRGARRLRLELHRVDRETAQVEIGLARPMRDPERIAALFKKGVSEVEAGF
GIEAMRLVAHVTEDLPPEQIGGPRTIAREDALADLFSRLGNRLGFDRVLRLLPATSKIPERSFLVTPAAYSAAEPPPPHR
GPDRPIIIFPSEPVTTKGLGQPGHPPARFAWRRMSFTTLRADGPERIAPEWWFDDPAWRSGLRDYWRVETREGARLWLYH
TPQAPAWPAQSWFAQGEFA
>Mature_498_residues
ARRLLSIRFPRLASDTSLRRRPVEGPFALIHRSGNAEHVHCLNQAAEMRGLHPGMAAADARAICPELITRPADLAREAAA
LAGLRRWAGRYSPMVARDGPGGLIADISGVPHLFGGEAEMRGDLHARLERVGLTLSSAIAETRGAAQALARHGGGILPEG
AAKEGIARLPVSALRIGSDVAEGLARMGLNRIGDLTDLPRAPLARRFGPGLVLRLDQALGLQPEPVSPEADAPYFGVRMT
MPDPIGLEADVMSGLARLLDRLCSTLAQHHRGARRLRLELHRVDRETAQVEIGLARPMRDPERIAALFKKGVSEVEAGFG
IEAMRLVAHVTEDLPPEQIGGPRTIAREDALADLFSRLGNRLGFDRVLRLLPATSKIPERSFLVTPAAYSAAEPPPPHRG
PDRPIIIFPSEPVTTKGLGQPGHPPARFAWRRMSFTTLRADGPERIAPEWWFDDPAWRSGLRDYWRVETREGARLWLYHT
PQAPAWPAQSWFAQGEFA

Specific function: Along with dnaE2 and imuA is required for the error- prone processing of DNA lesions [H]

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001126 [H]

Pfam domain/function: PF00817 IMS [H]

EC number: NA

Molecular weight: Translated: 54554; Mature: 54423

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRLLSIRFPRLASDTSLRRRPVEGPFALIHRSGNAEHVHCLNQAAEMRGLHPGMAAAD
CCCCHHHHCCCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHH
ARAICPELITRPADLAREAAALAGLRRWAGRYSPMVARDGPGGLIADISGVPHLFGGEAE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEECCCCCCCCCCCHH
MRGDLHARLERVGLTLSSAIAETRGAAQALARHGGGILPEGAAKEGIARLPVSALRIGSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHCCHHHHHHHHH
VAEGLARMGLNRIGDLTDLPRAPLARRFGPGLVLRLDQALGLQPEPVSPEADAPYFGVRM
HHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEHHHHCCCCCCCCCCCCCCEEEEEE
TMPDPIGLEADVMSGLARLLDRLCSTLAQHHRGARRLRLELHRVDRETAQVEIGLARPMR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHEEEEEHHCCCC
DPERIAALFKKGVSEVEAGFGIEAMRLVAHVTEDLPPEQIGGPRTIAREDALADLFSRLG
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHH
NRLGFDRVLRLLPATSKIPERSFLVTPAAYSAAEPPPPHRGPDRPIIIFPSEPVTTKGLG
HHCCHHHHHHHHCCCCCCCCCCEEECCCHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
QPGHPPARFAWRRMSFTTLRADGPERIAPEWWFDDPAWRSGLRDYWRVETREGARLWLYH
CCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCEEEEEE
TPQAPAWPAQSWFAQGEFA
CCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
ARRLLSIRFPRLASDTSLRRRPVEGPFALIHRSGNAEHVHCLNQAAEMRGLHPGMAAAD
CCCHHHHCCCCCCCCCHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHH
ARAICPELITRPADLAREAAALAGLRRWAGRYSPMVARDGPGGLIADISGVPHLFGGEAE
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEECCCCCCCCCCCHH
MRGDLHARLERVGLTLSSAIAETRGAAQALARHGGGILPEGAAKEGIARLPVSALRIGSD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHHCCHHHHHHHHH
VAEGLARMGLNRIGDLTDLPRAPLARRFGPGLVLRLDQALGLQPEPVSPEADAPYFGVRM
HHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEHHHHCCCCCCCCCCCCCCEEEEEE
TMPDPIGLEADVMSGLARLLDRLCSTLAQHHRGARRLRLELHRVDRETAQVEIGLARPMR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHEEEEEHHCCCC
DPERIAALFKKGVSEVEAGFGIEAMRLVAHVTEDLPPEQIGGPRTIAREDALADLFSRLG
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHH
NRLGFDRVLRLLPATSKIPERSFLVTPAAYSAAEPPPPHRGPDRPIIIFPSEPVTTKGLG
HHCCHHHHHHHHCCCCCCCCCCEEECCCHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
QPGHPPARFAWRRMSFTTLRADGPERIAPEWWFDDPAWRSGLRDYWRVETREGARLWLYH
CCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHEEECCCCCEEEEEE
TPQAPAWPAQSWFAQGEFA
CCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA