| Definition | Dinoroseobacter shibae DFL 12 plasmid pDSHI03, complete sequence. |
|---|---|
| Accession | NC_009957 |
| Length | 126,304 |
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The map label for this gene is lgt [H]
Identifier: 159046479
GI number: 159046479
Start: 7381
End: 8301
Strand: Direct
Name: lgt [H]
Synonym: Dshi_3940
Alternate gene names: 159046479
Gene position: 7381-8301 (Clockwise)
Preceding gene: 159046478
Following gene: 159046480
Centisome position: 5.84
GC content: 59.5
Gene sequence:
>921_bases GTGCTGCCAGCGGGATTGCCATTTCCGGATATTGGAACCGACCTCTTCTCCTTCGACATCGGGGGGGTCACATTCGCACT CCGCTGGTACGCGCTAGCCTATATCTTCGGTATCCTGATTGGCTGGCGCATTTGTTCGAGTGCCATAAGCCGTCCCGCGC TCTGGACGTCAGCTGGACCGCCGCTTGACCGAACGCAGATCGAAGATCTTCTGACGTGGATCATCATCGGCGTGATTGCT GGTGGTCGCCTGGGCTTTGTACTGTTCTACCAGCCCGCATATTATCTCGCCAATCCCTTGGAAATTCTGATGGTCTGGCA AGGCGGCATGTCTTTCCACGGGGGGTTCGCGGGAGTTGTCATCGCGGCCTTGCTGTTCTGCCTTAGACAGAACGCGTCAT TGCTCAGCACTGGCGACTTGCTGGCTTTGGCAACACCACCAGGCTTGTTTCTTGGAAGGCTGGCGAACTTCACCAACAAT GAGTTGTGGGGGCGTCCAACGGACGTTCCCTGGGCGGTGATCTTTCCCGGCGAAGTCGCGCAGGCCTGCCCAGGGGTTAG CGGCCTCTGCGCCCGACACCCGTCCCAGCTGTACGAGGCGGTATTGGAGGGGCTCATTCTTGGAATACTGCTCATTTATC TCGCTTGGGGCCGGGGCTGGCTGAAAATGCCCGGTGCCTTGGCTGGCGTGTTTCTGACCGGCTATGGTCTTGCCCGAAGT TTCGTCGAGATGTTCCGGCAACCGGACCAACAATTTGTGACGGCGGACAACCCGATCGGCCATGCGCTTCATTTTGGTGA GTGGGGTTTGACCATGGGCCAGTTGCTCTCCATGCCAATGGCGCTGGTCGGGCTGGCGTTGATCGTGTTCGCCCGGCGGG AACGGGGCCGGACAGCGCCACCCCGCAGAGCCGCAATGTAA
Upstream 100 bases:
>100_bases GGATGGGCGTTGGATGCCCTGTCGCAGATCGAGCGCCTTTAGCGGTGCTCGATCAATGCCATCTAATCCCCACGTAAATT CCTGATGAGGAACTCACCCA
Downstream 100 bases:
>100_bases TCGCCGTACTGATCTCTCTTGACCCTCCCGCGGATGGAAGCCCTAGGCAAGAGAAGCATTCTCGGAAAGGACCGCAAAAT GAGCACTCCCGACAGTTCTG
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MLPAGLPFPDIGTDLFSFDIGGVTFALRWYALAYIFGILIGWRICSSAISRPALWTSAGPPLDRTQIEDLLTWIIIGVIA GGRLGFVLFYQPAYYLANPLEILMVWQGGMSFHGGFAGVVIAALLFCLRQNASLLSTGDLLALATPPGLFLGRLANFTNN ELWGRPTDVPWAVIFPGEVAQACPGVSGLCARHPSQLYEAVLEGLILGILLIYLAWGRGWLKMPGALAGVFLTGYGLARS FVEMFRQPDQQFVTADNPIGHALHFGEWGLTMGQLLSMPMALVGLALIVFARRERGRTAPPRRAAM
Sequences:
>Translated_306_residues MLPAGLPFPDIGTDLFSFDIGGVTFALRWYALAYIFGILIGWRICSSAISRPALWTSAGPPLDRTQIEDLLTWIIIGVIA GGRLGFVLFYQPAYYLANPLEILMVWQGGMSFHGGFAGVVIAALLFCLRQNASLLSTGDLLALATPPGLFLGRLANFTNN ELWGRPTDVPWAVIFPGEVAQACPGVSGLCARHPSQLYEAVLEGLILGILLIYLAWGRGWLKMPGALAGVFLTGYGLARS FVEMFRQPDQQFVTADNPIGHALHFGEWGLTMGQLLSMPMALVGLALIVFARRERGRTAPPRRAAM >Mature_306_residues MLPAGLPFPDIGTDLFSFDIGGVTFALRWYALAYIFGILIGWRICSSAISRPALWTSAGPPLDRTQIEDLLTWIIIGVIA GGRLGFVLFYQPAYYLANPLEILMVWQGGMSFHGGFAGVVIAALLFCLRQNASLLSTGDLLALATPPGLFLGRLANFTNN ELWGRPTDVPWAVIFPGEVAQACPGVSGLCARHPSQLYEAVLEGLILGILLIYLAWGRGWLKMPGALAGVFLTGYGLARS FVEMFRQPDQQFVTADNPIGHALHFGEWGLTMGQLLSMPMALVGLALIVFARRERGRTAPPRRAAM
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=313, Percent_Identity=38.3386581469649, Blast_Score=182, Evalue=3e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 33209; Mature: 33209
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPAGLPFPDIGTDLFSFDIGGVTFALRWYALAYIFGILIGWRICSSAISRPALWTSAGP CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC PLDRTQIEDLLTWIIIGVIAGGRLGFVLFYQPAYYLANPLEILMVWQGGMSFHGGFAGVV CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCHHHEEEEECCCCCCCCCHHHHH IAALLFCLRQNASLLSTGDLLALATPPGLFLGRLANFTNNELWGRPTDVPWAVIFPGEVA HHHHHHHHHCCCCEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHH QACPGVSGLCARHPSQLYEAVLEGLILGILLIYLAWGRGWLKMPGALAGVFLTGYGLARS HHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHH FVEMFRQPDQQFVTADNPIGHALHFGEWGLTMGQLLSMPMALVGLALIVFARRERGRTAP HHHHHHCCCHHEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PRRAAM CHHCCC >Mature Secondary Structure MLPAGLPFPDIGTDLFSFDIGGVTFALRWYALAYIFGILIGWRICSSAISRPALWTSAGP CCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCC PLDRTQIEDLLTWIIIGVIAGGRLGFVLFYQPAYYLANPLEILMVWQGGMSFHGGFAGVV CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCHHHEEEEECCCCCCCCCHHHHH IAALLFCLRQNASLLSTGDLLALATPPGLFLGRLANFTNNELWGRPTDVPWAVIFPGEVA HHHHHHHHHCCCCEECCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCHHH QACPGVSGLCARHPSQLYEAVLEGLILGILLIYLAWGRGWLKMPGALAGVFLTGYGLARS HHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHH FVEMFRQPDQQFVTADNPIGHALHFGEWGLTMGQLLSMPMALVGLALIVFARRERGRTAP HHHHHHCCCHHEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PRRAAM CHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA