Definition | Dinoroseobacter shibae DFL 12 chromosome, complete genome. |
---|---|
Accession | NC_009952 |
Length | 3,789,584 |
Click here to switch to the map view.
The map label for this gene is glyA
Identifier: 159044656
GI number:
Start: 2241420
End: 2242694
Strand: Reverse
Name: glyA
Synonym: Dshi_2113
Alternate gene names: NA
Gene position: NA
Preceding gene: 159044657
Following gene: 284928600
Centisome position: NA
GC content: NA
Gene sequence:
>1275_bases ATGCTCAAGACCCTGAACACCGCGGGCATCTCCGACACCGCCATCGCCGAGGCGATCGGCCACGAGCTCGACCGCCAGCA GACCCAGATCGAACTGATCGCCTCCGAAAACATCGTCAGCGTCGATGTGCTGCGCGCCCAGGGCTCGGTTCTGACCAACA AATACGCCGAAGGCTACCCGGGCCGCCGCTACTATGGCGGGTGCGAGCATGTCGACACGGTCGAACAGATCGCGATCGAC CGGGTGTGCGAGTTGTTCGGATCCCGCTTCGCCAACGTGCAGGCGCATTCCGGCGCCCAGGCCAACCAGGCGGTGTTTCT CGCCCTGCTCAAGCCCGGTGACCGGATCATGGGTCTCGACCTGGCCCATGGCGGCCACCTGACCCACGGCTCGCCGGTGA CCATGTCCGGCAAGTGGTTCGACGTGGTCAGCTACGAGGTGTCGAGGGACGATCACCTGATCGACATGGACAATGTCCGG AAGGTCGCGCTGGACACCAAGCCCAAGCTGATCGTCGCCGGGGCCTCGGCCTATCCGCGGCACATGGATTTCGCGGCCTT CCGGGCGATTGCAGACGAGGTGGGCGCCTGGCTGATGGTGGACATGGCCCATTACGCGGGCCTGATCGCGGCGGGCGAAT ACCCCGACCCGGTGCCCCACGCCCATGTCGTGACCTCGACCACGCACAAGACCCTGCGCGGCCCGCGCGGCGGCATCATC CTGACCAATGACGAGGCGCTGGCCAAGAAGTTCAACTCCGCCGTGTTCCCCGGTAACCAGGGCGGCCCGTTGATGCATGT CATCGCGGCCAAGGCGGTGGCCTTCGGCGAAGCGCTGGAGCCGTCCTTCAAGCAATACGCCAAGGACGTGATCGCCAACG CGCGCGCCCTGTCCGAGGTGCTGGTTGCAGGCGGGCTGGGCGTGGTTTCGGGCGGCACGGATTGCCACATGGTCCTTGTG GACCTGCGCCCCAAGGGTGTGACCGGCAAGGCCGCTGAGAACGCGCTCGAACGCGCAGGGCTGACCTGCAACAAGAACGC GATCCCGTTCGACCCGGAAAAGCCCTTCGTGACCTCCGGGGTGCGGCTCGGCACCTCCGCGGGCACCACCCGTGGTTTCG GTGAGGCCGAGTTCCGCAAGGTGGGCGCGCTTGTCCTGCGGGTGATCGACGCGCTTGCCGAGAATGCCGAGGGCGACGCC GCCGTCGAGGCCGCAGTGCTGGAAGAGGTGCGCGCCCTGTGTGCCGCGCATCCGATCTACGCCGACGACGTGTAG
Upstream 100 bases:
>100_bases CTCGCCGTCGGTCTCTGACCGTCTGCACATCCCCCGGTCATGTCCGCGCCCCCGCCTTGGGGGCGCGCCCCATAACTCTT GCCTGAAAAGGAGCCTCTCC
Downstream 100 bases:
>100_bases TCCGATGTTCCTGTCGGTCTTCGATATCTTCAAGGTCGGCGTCGGTCCGTCCTCATCGCACACGATGGGGCCGATGACAG CAGCCGCGCGGTTCCTCGAC
Product: serine hydroxymethyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>424_residues MLKTLNTAGISDTAIAEAIGHELDRQQTQIELIASENIVSVDVLRAQGSVLTNKYAEGYPGRRYYGGCEHVDTVEQIAID RVCELFGSRFANVQAHSGAQANQAVFLALLKPGDRIMGLDLAHGGHLTHGSPVTMSGKWFDVVSYEVSRDDHLIDMDNVR KVALDTKPKLIVAGASAYPRHMDFAAFRAIADEVGAWLMVDMAHYAGLIAAGEYPDPVPHAHVVTSTTHKTLRGPRGGII LTNDEALAKKFNSAVFPGNQGGPLMHVIAAKAVAFGEALEPSFKQYAKDVIANARALSEVLVAGGLGVVSGGTDCHMVLV DLRPKGVTGKAAENALERAGLTCNKNAIPFDPEKPFVTSGVRLGTSAGTTRGFGEAEFRKVGALVLRVIDALAENAEGDA AVEAAVLEEVRALCAAHPIYADDV
Sequences:
NA
Specific function: NA
COG id: COG0112
COG function: function code E; Glycine/serine hydroxymethyltransferase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA