Click here to switch to the map view.

The map label for this gene is 15899080

Identifier: 15899080

GI number: 15899080

Start: 2122901

End: 2123659

Strand: Reverse

Name: 15899080

Synonym: SSO2322

Alternate gene names: NA

Gene position: 2123659-2122901 (Counterclockwise)

Preceding gene: 15899081

Following gene: 15899078

Centisome position: 70.97

GC content: 33.2

Gene sequence:

>759_bases
ATGATAAACATAAACTTACCTGAATTGCAACAACTAGTGGAGTCTCCACTATTTATTTTACTGATTAGCATAAGCATACC
CTTGGCAGCATTCTTTATATCCTTTTTTAAGATAGTATTGCCAAGAATAACTAGGCCTAAAAATATACAAACAACTCAAA
CTGCTTCTACTACACAAAATCAGCAACAACAAGGAGTTACGAGTAATTCTACCAAGGAGATTGAAGAACTTCTTAAGAAC
CTAATAGGTAGAATGGATAAATATCAAAATGATCTAGTAAATGTTCTAAATACATCTATAGAAGATTTAAAGCAGACTTT
ACAGAAATTAAATTCTTCTATTGAAGATGCCGTTTTATCTCTAAAATCTGCTCAAGCTGATTCATCATCACCTTTCAATA
TCATATCAGAGCAGTCTAAAGGCGAACAGAGGCCAGAAGGTAGTAAAGAATTAAAGGCTGTAGCGGAAATTGTTGGAACA
TCGAATATAGATTTGAGCGTTTTCATTAGAAATTGTGTATTGCTAGAAATCTTAGACTATGAGGATTCTAAGTTGACAGC
TTTATATGAACTAGGTTATATCTCTGCAGATGATATGTTCATTGTTAACAAGATACAATCTTATATTAGGACTAATAATG
GAAAGATAAGAGCAAAAGATTTAGCAAATATTGCAATGAGTGTTGCCGAAAGTTACTCCTCCGTGACTGCAGAAATGAAA
AAGTATCTATTGGTATTGGAGGTTGGGAAGAATGGCTAG

Upstream 100 bases:

>100_bases
AGGGTAGCGTATCAGTAATAGGGTGAGATTAAAGTGCTAAAAAAGGTAAGAAAAAGGTATTTCATCTTTTTTTCCATTTA
TAGCATTCGTGAGGTGAGGG

Downstream 100 bases:

>100_bases
TGAAGTGATTAGCGAGACAATAATGCTAATCGTAGCAGTTACATTGGTAGGAGTGCTTGCAGGTTCGGTTTTTTCCGTAG
TATCGTCAATTTCTACTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MININLPELQQLVESPLFILLISISIPLAAFFISFFKIVLPRITRPKNIQTTQTASTTQNQQQQGVTSNSTKEIEELLKN
LIGRMDKYQNDLVNVLNTSIEDLKQTLQKLNSSIEDAVLSLKSAQADSSSPFNIISEQSKGEQRPEGSKELKAVAEIVGT
SNIDLSVFIRNCVLLEILDYEDSKLTALYELGYISADDMFIVNKIQSYIRTNNGKIRAKDLANIAMSVAESYSSVTAEMK
KYLLVLEVGKNG

Sequences:

>Translated_252_residues
MININLPELQQLVESPLFILLISISIPLAAFFISFFKIVLPRITRPKNIQTTQTASTTQNQQQQGVTSNSTKEIEELLKN
LIGRMDKYQNDLVNVLNTSIEDLKQTLQKLNSSIEDAVLSLKSAQADSSSPFNIISEQSKGEQRPEGSKELKAVAEIVGT
SNIDLSVFIRNCVLLEILDYEDSKLTALYELGYISADDMFIVNKIQSYIRTNNGKIRAKDLANIAMSVAESYSSVTAEMK
KYLLVLEVGKNG
>Mature_252_residues
MININLPELQQLVESPLFILLISISIPLAAFFISFFKIVLPRITRPKNIQTTQTASTTQNQQQQGVTSNSTKEIEELLKN
LIGRMDKYQNDLVNVLNTSIEDLKQTLQKLNSSIEDAVLSLKSAQADSSSPFNIISEQSKGEQRPEGSKELKAVAEIVGT
SNIDLSVFIRNCVLLEILDYEDSKLTALYELGYISADDMFIVNKIQSYIRTNNGKIRAKDLANIAMSVAESYSSVTAEMK
KYLLVLEVGKNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28042; Mature: 28042

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MININLPELQQLVESPLFILLISISIPLAAFFISFFKIVLPRITRPKNIQTTQTASTTQN
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
QQQQGVTSNSTKEIEELLKNLIGRMDKYQNDLVNVLNTSIEDLKQTLQKLNSSIEDAVLS
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKSAQADSSSPFNIISEQSKGEQRPEGSKELKAVAEIVGTSNIDLSVFIRNCVLLEILDY
HHHHCCCCCCCCHHHCCHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
EDSKLTALYELGYISADDMFIVNKIQSYIRTNNGKIRAKDLANIAMSVAESYSSVTAEMK
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
KYLLVLEVGKNG
HHEEEEEECCCC
>Mature Secondary Structure
MININLPELQQLVESPLFILLISISIPLAAFFISFFKIVLPRITRPKNIQTTQTASTTQN
CCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
QQQQGVTSNSTKEIEELLKNLIGRMDKYQNDLVNVLNTSIEDLKQTLQKLNSSIEDAVLS
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKSAQADSSSPFNIISEQSKGEQRPEGSKELKAVAEIVGTSNIDLSVFIRNCVLLEILDY
HHHHCCCCCCCCHHHCCHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
EDSKLTALYELGYISADDMFIVNKIQSYIRTNNGKIRAKDLANIAMSVAESYSSVTAEMK
CCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
KYLLVLEVGKNG
HHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA