Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
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Accession | NC_002754 |
Length | 2,992,245 |
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The map label for this gene is 15899038
Identifier: 15899038
GI number: 15899038
Start: 2081153
End: 2082034
Strand: Reverse
Name: 15899038
Synonym: SSO2272
Alternate gene names: NA
Gene position: 2082034-2081153 (Counterclockwise)
Preceding gene: 15899040
Following gene: 15899037
Centisome position: 69.58
GC content: 37.87
Gene sequence:
>882_bases ATGTTTCAAGATCCAACATTTCAAATCACCGTAACTCAATTACAATACTTGCTTTCTATCATTTCTGGAATATTGGTAGG ATTCAGCCTCGGTCTTATTGGAGGAGGAGGTTCGATTCTCGCAATTCCCCTTCTATTATACTTTGTAGGTTTAGCAAATG GAATTCCACCTGGATCACCAGAATATACCTATATAACACATCTTACCTTAGGAACTACAGCACTTGCGGTCGGTCTAAAT TCCTACATCAACTCTTATATGCATTTTAGGAGAGGTAATGTTAGAGTACCAGAAGGAATAATATTCACAATTCCAGGAGT AATAGGGGATGTAATAGGGGCTTATCTGAGCCATTTAATGTCGGGGGCGTTAATCCTATTTCTCTTCGGCTTTCTGATGA TCGCAGTAGCAATTAGAATGTGGAGATCTAAATGCAATCCTAATAGAAGCGTATTATACAATAACTCTCATAAATTGAGT CTACGTGAAAGAATAAAAGTAACTAAAGTAATCCCAGCAGGGTTTTTAGTAGGGTTTGCCTCTGGATACTTCGGAATAGG AGGAGGGTTTCTGGTAGTTCCAGGTTTATTGTTCAGCACTGGTTTAGATATGCTTAGGGCTGTCGGTACATCACTAATTG CAGTAGGTACGTTTGGTGTTACGGCAGCAATTACATACGCGGTGTATGGGTATGTTGATATAGTGATAAGCTTACTATAC CTATTAGGAGGAGTAGTTGGTGGATATACTGGATCCACAATTGCGTCAAGAATGCCAAGACAAACTTTAAGGAAACTATT TGCAATAATTATTATAGTAGTTGCTATATATACGATGTACATAAATAGAGTAGGAGTAGTAGAATTATTGCATTTTCTGT AA
Upstream 100 bases:
>100_bases AAAGAAAAGTCTAACAAATTTAATAAAGTTAGCTTTAAAAGGACTTACAAAGTTTTACATAATCATAAACTTTTTAAAGT TAAAACAAGATTTAGTTATT
Downstream 100 bases:
>100_bases ATCTTGATAGAATTTTTCGATTTCCTCTGATATAATATCCAATGATCTTTTGATATTTTCAAGAACTACTTCATAGTTTT CCTCTTCTAGCCCTTTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MFQDPTFQITVTQLQYLLSIISGILVGFSLGLIGGGGSILAIPLLLYFVGLANGIPPGSPEYTYITHLTLGTTALAVGLN SYINSYMHFRRGNVRVPEGIIFTIPGVIGDVIGAYLSHLMSGALILFLFGFLMIAVAIRMWRSKCNPNRSVLYNNSHKLS LRERIKVTKVIPAGFLVGFASGYFGIGGGFLVVPGLLFSTGLDMLRAVGTSLIAVGTFGVTAAITYAVYGYVDIVISLLY LLGGVVGGYTGSTIASRMPRQTLRKLFAIIIIVVAIYTMYINRVGVVELLHFL
Sequences:
>Translated_293_residues MFQDPTFQITVTQLQYLLSIISGILVGFSLGLIGGGGSILAIPLLLYFVGLANGIPPGSPEYTYITHLTLGTTALAVGLN SYINSYMHFRRGNVRVPEGIIFTIPGVIGDVIGAYLSHLMSGALILFLFGFLMIAVAIRMWRSKCNPNRSVLYNNSHKLS LRERIKVTKVIPAGFLVGFASGYFGIGGGFLVVPGLLFSTGLDMLRAVGTSLIAVGTFGVTAAITYAVYGYVDIVISLLY LLGGVVGGYTGSTIASRMPRQTLRKLFAIIIIVVAIYTMYINRVGVVELLHFL >Mature_293_residues MFQDPTFQITVTQLQYLLSIISGILVGFSLGLIGGGGSILAIPLLLYFVGLANGIPPGSPEYTYITHLTLGTTALAVGLN SYINSYMHFRRGNVRVPEGIIFTIPGVIGDVIGAYLSHLMSGALILFLFGFLMIAVAIRMWRSKCNPNRSVLYNNSHKLS LRERIKVTKVIPAGFLVGFASGYFGIGGGFLVVPGLLFSTGLDMLRAVGTSLIAVGTFGVTAAITYAVYGYVDIVISLLY LLGGVVGGYTGSTIASRMPRQTLRKLFAIIIIVVAIYTMYINRVGVVELLHFL
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 31486; Mature: 31486
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQDPTFQITVTQLQYLLSIISGILVGFSLGLIGGGGSILAIPLLLYFVGLANGIPPGSP CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC EYTYITHLTLGTTALAVGLNSYINSYMHFRRGNVRVPEGIIFTIPGVIGDVIGAYLSHLM CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHH SGALILFLFGFLMIAVAIRMWRSKCNPNRSVLYNNSHKLSLRERIKVTKVIPAGFLVGFA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH SGYFGIGGGFLVVPGLLFSTGLDMLRAVGTSLIAVGTFGVTAAITYAVYGYVDIVISLLY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGGVVGGYTGSTIASRMPRQTLRKLFAIIIIVVAIYTMYINRVGVVELLHFL HHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MFQDPTFQITVTQLQYLLSIISGILVGFSLGLIGGGGSILAIPLLLYFVGLANGIPPGSP CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCC EYTYITHLTLGTTALAVGLNSYINSYMHFRRGNVRVPEGIIFTIPGVIGDVIGAYLSHLM CCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHH SGALILFLFGFLMIAVAIRMWRSKCNPNRSVLYNNSHKLSLRERIKVTKVIPAGFLVGFA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHH SGYFGIGGGFLVVPGLLFSTGLDMLRAVGTSLIAVGTFGVTAAITYAVYGYVDIVISLLY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGGVVGGYTGSTIASRMPRQTLRKLFAIIIIVVAIYTMYINRVGVVELLHFL HHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12533478 [H]