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The map label for this gene is rnp4

Identifier: 15899000

GI number: 15899000

Start: 2045582

End: 2045902

Strand: Reverse

Name: rnp4

Synonym: SSO2225

Alternate gene names: 15899000

Gene position: 2045902-2045582 (Counterclockwise)

Preceding gene: 15899002

Following gene: 15898999

Centisome position: 68.37

GC content: 34.58

Gene sequence:

>321_bases
GTGAGAAGAAAAAACCAGATTAAGAAGAGGATTATCGAGCTTATAGAGCTAGCTTACAATACTGCAAAGAGTGGTAATCT
GGAGTTAGCTAGAGAGTATGTAAAATTAGCTGAGATGTATTCTAGAAAAGGTAAGGTCGAAATTCCTTTAAAGTACAAAC
GAATGTTTTGTAGGAAGTGCTACACACCATTAATTATTGGAGTAACTGAGAGAAGGAGAATGAGGTCAAAGATTTTAATT
AGAACATGCCTAATTTGTAATTGGCAAAGGAGATATGTACTCTCAGGAAATAAAAGATCTGATAAAGAAAACGAGAGCTG
A

Upstream 100 bases:

>100_bases
GATTAACTATTTCTTTAGGAACTAGTTCTAAACTGGCTTCCAATAAGATGATGTTTAAATGCATAGAATATTTTAACATA
AAGAGGATTTATTAGTTATT

Downstream 100 bases:

>100_bases
AAGAGCAGATATAAGAATAGGAAAATATGGTGTAACAGAAGGTATGATAAACGAAATAAAAAGAAGATTAAATGAACATA
AGGTTGTAAAGGTAAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: RNase P component 4

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MRRKNQIKKRIIELIELAYNTAKSGNLELAREYVKLAEMYSRKGKVEIPLKYKRMFCRKCYTPLIIGVTERRRMRSKILI
RTCLICNWQRRYVLSGNKRSDKENES

Sequences:

>Translated_106_residues
MRRKNQIKKRIIELIELAYNTAKSGNLELAREYVKLAEMYSRKGKVEIPLKYKRMFCRKCYTPLIIGVTERRRMRSKILI
RTCLICNWQRRYVLSGNKRSDKENES
>Mature_106_residues
MRRKNQIKKRIIELIELAYNTAKSGNLELAREYVKLAEMYSRKGKVEIPLKYKRMFCRKCYTPLIIGVTERRRMRSKILI
RTCLICNWQRRYVLSGNKRSDKENES

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends

COG id: COG2023

COG function: function code J; RNase P subunit RPR2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 4 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNP4_SULSO (Q97WJ1)

Other databases:

- EMBL:   AE006641
- PIR:   D90392
- RefSeq:   NP_343605.1
- ProteinModelPortal:   Q97WJ1
- SMR:   Q97WJ1
- GeneID:   1453722
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO2225
- NMPDR:   fig|273057.1.peg.2028
- HOGENOM:   HBG731499
- OMA:   FKIPIEY
- ProtClustDB:   CLSK803260
- BioCyc:   SSOL273057:SSO2225-MONOMER
- BRENDA:   3.1.26.5
- HAMAP:   MF_00757
- InterPro:   IPR016432
- InterPro:   IPR007175
- PIRSF:   PIRSF004878

Pfam domain/function: PF04032 Rpr2

EC number: =3.1.26.5

Molecular weight: Translated: 12788; Mature: 12788

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRKNQIKKRIIELIELAYNTAKSGNLELAREYVKLAEMYSRKGKVEIPLKYKRMFCRKC
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHH
YTPLIIGVTERRRMRSKILIRTCLICNWQRRYVLSGNKRSDKENES
CCHHEECCHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCC
>Mature Secondary Structure
MRRKNQIKKRIIELIELAYNTAKSGNLELAREYVKLAEMYSRKGKVEIPLKYKRMFCRKC
CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHH
YTPLIIGVTERRRMRSKILIRTCLICNWQRRYVLSGNKRSDKENES
CCHHEECCHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726