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The map label for this gene is insQ [H]

Identifier: 15898926

GI number: 15898926

Start: 1971177

End: 1971818

Strand: Reverse

Name: insQ [H]

Synonym: SSO2143

Alternate gene names: 15898926

Gene position: 1971818-1971177 (Counterclockwise)

Preceding gene: 15898927

Following gene: 15898925

Centisome position: 65.9

GC content: 42.21

Gene sequence:

>642_bases
ATGGTAGTGAAGCTAACAAGATCTGAGAGGATTTACATCACTTTCGTAGTTGATCACGAATTCCCCAAGTTACCTAACAC
TGGTAAGGAAGTGGCGATAGATGTTGGCATAGAGAAGCTGATCGTAACGTCGGATGGTGAATATTTCCCCAATCTGAGAC
CTCTTGAAAAGGCGTTATGGAAAGTGAAGCATCTACACAGAGAACTTTCAAGAAAGAAGTTCCTCTCTAATAATTGGTTT
AAGGCTAAGGTTAAGCTTGCTAGGGCTTATGAGCATTTGAAGAACTTGAGGAGGGATCTTTACATGAAGTTGGGTAAATG
GTTTGCTGAGCATTACGATGTTGCAGTCATGGAGGGTATTCATGTTAAGCAGTTGATAGGTAAGTCATTAAGGTCTCTGA
GGAGGAGATTGAGTGACGTCGCGTTCAGCGAGCTTAGAGATTTGATTAAGTATCAGTTGGAGAAATACGGTAAGAAACTC
ATCCTGGTCAACCCAGCATACACTTCCAAAACTTGTGCTAAGTGCGGGTACGTAAAAGAAGATCTGTCTCTATCTGATCG
TGTTTTCGTTTGTCCCAACTGTGGTTGGATTGCAGATCGTGACTATAATGCTTCTCTTAACATCTTACGTGGATCGGGGT
AG

Upstream 100 bases:

>100_bases
CAAGAAGAATAAGAAGAAACTAATAACGCTTAAACTATCAAATCTTGGTACGTTCAAGGTAATAGTTCACCGAGACTTTC
CCCTTGACAAAGTAAAGAGA

Downstream 100 bases:

>100_bases
GAGCGACCCTTAGTGCCTGTGGAGCTCCGCCCTCTACCAGTACCAGCACTTCGGTACTGGCATGGCAGAGCTGTGAAGCA
GGAAGCTCCCTCATTTATGA

Product: second ORF in transposon ISC1316

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MVVKLTRSERIYITFVVDHEFPKLPNTGKEVAIDVGIEKLIVTSDGEYFPNLRPLEKALWKVKHLHRELSRKKFLSNNWF
KAKVKLARAYEHLKNLRRDLYMKLGKWFAEHYDVAVMEGIHVKQLIGKSLRSLRRRLSDVAFSELRDLIKYQLEKYGKKL
ILVNPAYTSKTCAKCGYVKEDLSLSDRVFVCPNCGWIADRDYNASLNILRGSG

Sequences:

>Translated_213_residues
MVVKLTRSERIYITFVVDHEFPKLPNTGKEVAIDVGIEKLIVTSDGEYFPNLRPLEKALWKVKHLHRELSRKKFLSNNWF
KAKVKLARAYEHLKNLRRDLYMKLGKWFAEHYDVAVMEGIHVKQLIGKSLRSLRRRLSDVAFSELRDLIKYQLEKYGKKL
ILVNPAYTSKTCAKCGYVKEDLSLSDRVFVCPNCGWIADRDYNASLNILRGSG
>Mature_213_residues
MVVKLTRSERIYITFVVDHEFPKLPNTGKEVAIDVGIEKLIVTSDGEYFPNLRPLEKALWKVKHLHRELSRKKFLSNNWF
KAKVKLARAYEHLKNLRRDLYMKLGKWFAEHYDVAVMEGIHVKQLIGKSLRSLRRRLSDVAFSELRDLIKYQLEKYGKKL
ILVNPAYTSKTCAKCGYVKEDLSLSDRVFVCPNCGWIADRDYNASLNILRGSG

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transposase 35 family [H]

Homologues:

Organism=Escherichia coli, GI288549314, Length=213, Percent_Identity=32.3943661971831, Blast_Score=111, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001959
- InterPro:   IPR010095
- InterPro:   IPR021027 [H]

Pfam domain/function: PF12323 HTH_14; PF01385 Transposase_2; PF07282 Transposase_35 [H]

EC number: NA

Molecular weight: Translated: 24791; Mature: 24791

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVKLTRSERIYITFVVDHEFPKLPNTGKEVAIDVGIEKLIVTSDGEYFPNLRPLEKALW
CEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHHHH
KVKHLHRELSRKKFLSNNWFKAKVKLARAYEHLKNLRRDLYMKLGKWFAEHYDVAVMEGI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
HVKQLIGKSLRSLRRRLSDVAFSELRDLIKYQLEKYGKKLILVNPAYTSKTCAKCGYVKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCHH
DLSLSDRVFVCPNCGWIADRDYNASLNILRGSG
CCCCCCCEEECCCCCEEECCCCCCEEEEEECCC
>Mature Secondary Structure
MVVKLTRSERIYITFVVDHEFPKLPNTGKEVAIDVGIEKLIVTSDGEYFPNLRPLEKALW
CEEEEECCCEEEEEEEEECCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCHHHHHHH
KVKHLHRELSRKKFLSNNWFKAKVKLARAYEHLKNLRRDLYMKLGKWFAEHYDVAVMEGI
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
HVKQLIGKSLRSLRRRLSDVAFSELRDLIKYQLEKYGKKLILVNPAYTSKTCAKCGYVKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHCCCCHH
DLSLSDRVFVCPNCGWIADRDYNASLNILRGSG
CCCCCCCEEECCCCCEEECCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]