Click here to switch to the map view.

The map label for this gene is clcD [C]

Identifier: 15898871

GI number: 15898871

Start: 1899747

End: 1900520

Strand: Reverse

Name: clcD [C]

Synonym: SSO2087

Alternate gene names: 15898871

Gene position: 1900520-1899747 (Counterclockwise)

Preceding gene: 15898872

Following gene: 15898870

Centisome position: 63.51

GC content: 39.02

Gene sequence:

>774_bases
ATGGAAAAGGAGATATTTTATGATTCAGACGGAGCTAAAATAAGGGCTTTCCTAGCTACCCCAGAAAATCCTAAATTGGC
AGTAATAGTAATACATGAAATATGGGGTCTTAATGATAATATAAAAGATATTTCAAGAAGGTTAGCAAATGAGGGCTATA
TGGCACTAGCTCCTCAATTATACACTAGGAATGAGGATGTTCTAAACGAGGGGAACATTCAAAATGTAATGATGAAAGTA
TGGAGTATACCACCAGAGAAGAGGAATGATCCAAATTCTTATCAACAAATAATGTCAGCGTTAGATGAAAAAGGTAAAAA
AGTAGCTGAGTTATTGGTCTTAAATAGACAAAAGACGGAGGAACAGATGATAAAGGACGCTATTAAGGCTTACGAGTACG
TAAGCTCACAAGGTGTTAAAAAGATAGTCAGTATGGGCTTCTGTATGGGTGGGGGTTTGGCATTTCAGTTAGCGACCGAA
GTACCACTAGATGGGACAATAGTCTTTTACGGCAGAAATCCACAACCATTGGAGGCAATCCAGAAGATAAAGGGGCCAAT
ATTAGGTCTATATGCTGGAGAGGACCCGCCAATAGATGCGGGGTTACCAGATCTAATTTCCGCTATAATAAAATATAAGA
AGGATTTAGAACTCAAAATTTACCCCGGAGCGTATCATGCGTTCTTTAATGATAGAGGGCGTTCGTATAATAAGGAAGCA
GCTGAAGATGCTTGGGAAAGAGTAAAGAGCTTTCTAAGGAGGGTGTCAAAGTGA

Upstream 100 bases:

>100_bases
CGATTTGTTGCTATATTCTGGCTTAATTGAAAGTTAATTATTTTTTTATCTAACAAAAATAGATAGTTAACTTTTAAACC
ATTCACCAGTAAAAGTTAAT

Downstream 100 bases:

>100_bases
GCGAGGAAAAGAAGAATAATAAGCAACAAGTGGATCCGTGTTTTTTGGCGTGGGTTCACTTGCTAGAAGTATTAGAAAAG
AAGGAGAAAAGGGACTAATT

Product: carboxymethylenebutenolidase, putative (clcD)

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MEKEIFYDSDGAKIRAFLATPENPKLAVIVIHEIWGLNDNIKDISRRLANEGYMALAPQLYTRNEDVLNEGNIQNVMMKV
WSIPPEKRNDPNSYQQIMSALDEKGKKVAELLVLNRQKTEEQMIKDAIKAYEYVSSQGVKKIVSMGFCMGGGLAFQLATE
VPLDGTIVFYGRNPQPLEAIQKIKGPILGLYAGEDPPIDAGLPDLISAIIKYKKDLELKIYPGAYHAFFNDRGRSYNKEA
AEDAWERVKSFLRRVSK

Sequences:

>Translated_257_residues
MEKEIFYDSDGAKIRAFLATPENPKLAVIVIHEIWGLNDNIKDISRRLANEGYMALAPQLYTRNEDVLNEGNIQNVMMKV
WSIPPEKRNDPNSYQQIMSALDEKGKKVAELLVLNRQKTEEQMIKDAIKAYEYVSSQGVKKIVSMGFCMGGGLAFQLATE
VPLDGTIVFYGRNPQPLEAIQKIKGPILGLYAGEDPPIDAGLPDLISAIIKYKKDLELKIYPGAYHAFFNDRGRSYNKEA
AEDAWERVKSFLRRVSK
>Mature_257_residues
MEKEIFYDSDGAKIRAFLATPENPKLAVIVIHEIWGLNDNIKDISRRLANEGYMALAPQLYTRNEDVLNEGNIQNVMMKV
WSIPPEKRNDPNSYQQIMSALDEKGKKVAELLVLNRQKTEEQMIKDAIKAYEYVSSQGVKKIVSMGFCMGGGLAFQLATE
VPLDGTIVFYGRNPQPLEAIQKIKGPILGLYAGEDPPIDAGLPDLISAIIKYKKDLELKIYPGAYHAFFNDRGRSYNKEA
AEDAWERVKSFLRRVSK

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family

Homologues:

Organism=Escherichia coli, GI48994982, Length=262, Percent_Identity=30.5343511450382, Blast_Score=107, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DLHH_SULSO (P95862)

Other databases:

- EMBL:   Y08256
- EMBL:   AE006641
- PIR:   S73082
- RefSeq:   NP_343476.1
- ProteinModelPortal:   P95862
- GeneID:   1453593
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO2087
- NMPDR:   fig|273057.1.peg.1899
- HOGENOM:   HBG673102
- OMA:   AFAPQLY
- PhylomeDB:   P95862
- ProtClustDB:   CLSK883757
- BioCyc:   SSOL273057:SSO2087-MONOMER
- BRENDA:   3.1.1.45
- InterPro:   IPR002925

Pfam domain/function: PF01738 DLH

EC number: =3.1.1.45

Molecular weight: Translated: 29017; Mature: 29017

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: ACT_SITE 148-148 ACT_SITE 195-195 ACT_SITE 226-226

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKEIFYDSDGAKIRAFLATPENPKLAVIVIHEIWGLNDNIKDISRRLANEGYMALAPQL
CCCCEEECCCCCEEEEEEECCCCCCEEEEEEEHHHCCCCCHHHHHHHHHCCCCEEECCHH
YTRNEDVLNEGNIQNVMMKVWSIPPEKRNDPNSYQQIMSALDEKGKKVAELLVLNRQKTE
HCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EQMIKDAIKAYEYVSSQGVKKIVSMGFCMGGGLAFQLATEVPLDGTIVFYGRNPQPLEAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCHHHHH
QKIKGPILGLYAGEDPPIDAGLPDLISAIIKYKKDLELKIYPGAYHAFFNDRGRSYNKEA
HHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCHHH
AEDAWERVKSFLRRVSK
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKEIFYDSDGAKIRAFLATPENPKLAVIVIHEIWGLNDNIKDISRRLANEGYMALAPQL
CCCCEEECCCCCEEEEEEECCCCCCEEEEEEEHHHCCCCCHHHHHHHHHCCCCEEECCHH
YTRNEDVLNEGNIQNVMMKVWSIPPEKRNDPNSYQQIMSALDEKGKKVAELLVLNRQKTE
HCCCHHHCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EQMIKDAIKAYEYVSSQGVKKIVSMGFCMGGGLAFQLATEVPLDGTIVFYGRNPQPLEAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCHHHHH
QKIKGPILGLYAGEDPPIDAGLPDLISAIIKYKKDLELKIYPGAYHAFFNDRGRSYNKEA
HHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHCCCCCCCCHHH
AEDAWERVKSFLRRVSK
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726