Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
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Accession | NC_002754 |
Length | 2,992,245 |
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The map label for this gene is 15898688
Identifier: 15898688
GI number: 15898688
Start: 1707093
End: 1708058
Strand: Reverse
Name: 15898688
Synonym: SSO1892
Alternate gene names: NA
Gene position: 1708058-1707093 (Counterclockwise)
Preceding gene: 15898689
Following gene: 15898685
Centisome position: 57.08
GC content: 35.4
Gene sequence:
>966_bases ATGAACAGTTTAGTTGATCAAATAATAAGTTGGATAATTGCGCTTTATGGCTCAGCAGTCCCAGCATTGTTAGTAATCTT CTTGATAGGTATAACTGGTTTAAAGGAAATAACGCGTTATGAGACTGGAAATACGTTTATGTACAAGTTAAATCCCGTTA CAAAAGTAATACTCACAATAGTAGTTATGACTGTAGCTGCTACTACAGTATGGTGGATAGGTGCCATATTGACCTTAATC CTCTTATTATCATATTTAACTCTAAATGAAGGAGTAAGGAAATTTGGATATGTGTCTTTCTTAACCCTTTCCACAATATT AGGTGGAACGTGGAGTGTTGCACCATATACACCTCCTAGTACACTACAACTCGCATTTCCTAATGAAAAACAGTTTACGG TAGTTTGGACTTTTCCATCTTATTTCCAAGTGATGGGATATGAGCAACAGTTAACGTTACAAGCACTAATCTATGGTCTT CAAACTTCATTTAGAATAGCCCCAGTCCTATTATCAGCATTACTGCTAATTACTACGACTACTGGATCTGATATTTTCAG GATGTTCACCAAAATAAAGATACCTATTGCAATTACGTTTTCGGTATTAGTTGGCATAAGGATGATACCTAGAATATTTG AACTGTTAGACACTTCAGTAAAAATGCAGTACATGAGGGGTTTAGGATACGGTAAACCGAAATTAATTTCTTCACTTCTA ATAGTTTATGCAATATTTGAGGCAATAATTCCGACTATGGTGTACTTGTTTAGGGGAGCTAAGAATTTGGCGATTTCGGC TGATACTAGAGGATTTAGGGCTTATCCAAGTAGGACTAGCCTAGTAGAACTTAAGTTTACAAGAGTTGACTATTACGGTG TTGCAATAATTATAGCGTTAATAGTTATGGCAATTTTAGCTAATTTACTTGGATTTGGGAGAACAATACCATACGTTGGA ATTTAA
Upstream 100 bases:
>100_bases AAAATAGTTTTAGAAGGAAAACCAGAGGAGGTTTTCAGTAAATCACTTAATCATGGTATAGAACCTCCATTAGAATACGA ATTGGGTGGGTTGATAAAAA
Downstream 100 bases:
>100_bases CTTTTTTTTTTTAATTTTTTCTTTATAAACCCATATAAGGCTACAGCGAGTTGAAGCTAATGAGATTTTATAAAAATTAT TTTTGGGAATCGTCAGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MNSLVDQIISWIIALYGSAVPALLVIFLIGITGLKEITRYETGNTFMYKLNPVTKVILTIVVMTVAATTVWWIGAILTLI LLLSYLTLNEGVRKFGYVSFLTLSTILGGTWSVAPYTPPSTLQLAFPNEKQFTVVWTFPSYFQVMGYEQQLTLQALIYGL QTSFRIAPVLLSALLLITTTTGSDIFRMFTKIKIPIAITFSVLVGIRMIPRIFELLDTSVKMQYMRGLGYGKPKLISSLL IVYAIFEAIIPTMVYLFRGAKNLAISADTRGFRAYPSRTSLVELKFTRVDYYGVAIIIALIVMAILANLLGFGRTIPYVG I
Sequences:
>Translated_321_residues MNSLVDQIISWIIALYGSAVPALLVIFLIGITGLKEITRYETGNTFMYKLNPVTKVILTIVVMTVAATTVWWIGAILTLI LLLSYLTLNEGVRKFGYVSFLTLSTILGGTWSVAPYTPPSTLQLAFPNEKQFTVVWTFPSYFQVMGYEQQLTLQALIYGL QTSFRIAPVLLSALLLITTTTGSDIFRMFTKIKIPIAITFSVLVGIRMIPRIFELLDTSVKMQYMRGLGYGKPKLISSLL IVYAIFEAIIPTMVYLFRGAKNLAISADTRGFRAYPSRTSLVELKFTRVDYYGVAIIIALIVMAILANLLGFGRTIPYVG I >Mature_321_residues MNSLVDQIISWIIALYGSAVPALLVIFLIGITGLKEITRYETGNTFMYKLNPVTKVILTIVVMTVAATTVWWIGAILTLI LLLSYLTLNEGVRKFGYVSFLTLSTILGGTWSVAPYTPPSTLQLAFPNEKQFTVVWTFPSYFQVMGYEQQLTLQALIYGL QTSFRIAPVLLSALLLITTTTGSDIFRMFTKIKIPIAITFSVLVGIRMIPRIFELLDTSVKMQYMRGLGYGKPKLISSLL IVYAIFEAIIPTMVYLFRGAKNLAISADTRGFRAYPSRTSLVELKFTRVDYYGVAIIIALIVMAILANLLGFGRTIPYVG I
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35738; Mature: 35738
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLVDQIISWIIALYGSAVPALLVIFLIGITGLKEITRYETGNTFMYKLNPVTKVILTI CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHH VVMTVAATTVWWIGAILTLILLLSYLTLNEGVRKFGYVSFLTLSTILGGTWSVAPYTPPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TLQLAFPNEKQFTVVWTFPSYFQVMGYEQQLTLQALIYGLQTSFRIAPVLLSALLLITTT CEEEECCCCCEEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TGSDIFRMFTKIKIPIAITFSVLVGIRMIPRIFELLDTSVKMQYMRGLGYGKPKLISSLL CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH IVYAIFEAIIPTMVYLFRGAKNLAISADTRGFRAYPSRTSLVELKFTRVDYYGVAIIIAL HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHH IVMAILANLLGFGRTIPYVGI HHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MNSLVDQIISWIIALYGSAVPALLVIFLIGITGLKEITRYETGNTFMYKLNPVTKVILTI CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHH VVMTVAATTVWWIGAILTLILLLSYLTLNEGVRKFGYVSFLTLSTILGGTWSVAPYTPPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TLQLAFPNEKQFTVVWTFPSYFQVMGYEQQLTLQALIYGLQTSFRIAPVLLSALLLITTT CEEEECCCCCEEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TGSDIFRMFTKIKIPIAITFSVLVGIRMIPRIFELLDTSVKMQYMRGLGYGKPKLISSLL CCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH IVYAIFEAIIPTMVYLFRGAKNLAISADTRGFRAYPSRTSLVELKFTRVDYYGVAIIIAL HHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHH IVMAILANLLGFGRTIPYVGI HHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA