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The map label for this gene is ydeD [C]

Identifier: 15898674

GI number: 15898674

Start: 1694683

End: 1695507

Strand: Reverse

Name: ydeD [C]

Synonym: SSO1880

Alternate gene names: 15898674

Gene position: 1695507-1694683 (Counterclockwise)

Preceding gene: 15898677

Following gene: 15898670

Centisome position: 56.66

GC content: 37.21

Gene sequence:

>825_bases
ATGCAGAGAACCACAATCTCGTTCCTTAGATGGATAGTTCCATTATCATTGTTCTGGGGATTTGCCTTCCCCTTAACTAA
AATAATTGCATACTCGGCATCTCCCATGATTATTAGTGCATTTAGAATTGGGATAGCAGCAATTTTCTTTTTAATATTAG
GTAGAGGACTATCAGTAGGTAAAAAGCAATTCATAAACGGTTTAATGAATTTCGCGTTCTTCCTAATCCTCATAAATCTA
GGAATTGGATTATCTCCAGATCCGGGTTTGGTAGCAGTAATGATTTATACACAGCCGATATTCGTTCTAATAATTGAGAG
ATTACTGGGACATAAGATCACACCTAAAGGGATTGTCGGCGTACTTTTAGGAGTAGTGGGAGTGATATCTTCAGCAACTT
TATCTTTTAACATTGGGTTAGTTTTCGGATTGCTGGCTGGGATACTGTGGGCTGGAGGTACCATTTATTATTCCAGAAAT
TTAGCTAAGGAAGATATTGTAAAACTTAACGCATTCATGACCTTAACCTCACTTCCCATAGTTCTAGCCTTTACTCCGAT
TGACTATTATTTCAGATTTAGTTTAGTTACACTATCCTTACTTTTACTATTGGCAATCCTAGCACAAATACTTGGGTTCT
ACTTCTGGTTTAATGGAGTTAGGGAATTGGGAACTGTTTATGCCAGTACTGGATCTTTATTAGTGCCAGTGATGGCTTAT
ATTACTAGTTTCGCAGTATTGGGTGTAGCTCCTACGCTACCTCAAATAATTGGATCGTTAATAACACTATTTGGAGTTTA
CCTTACCATTACTAGTAGAAGTTAG

Upstream 100 bases:

>100_bases
TTAAAATGGCATCTATTAACTCTTTATGAAAAATCATTAATTTCAAAAAGCAAATTGAGACTTCAGTTTTTTAATCTTTA
AATCTTTTCTGTTTTACCAC

Downstream 100 bases:

>100_bases
TTTATAAAAATTAACCAAGCTATTATAGGCTATCACAAGAGAATTTAATTTAGCTAGCTTTTCATCTTTGAGGTCATAGT
AATTTATTTGAACTTTAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MQRTTISFLRWIVPLSLFWGFAFPLTKIIAYSASPMIISAFRIGIAAIFFLILGRGLSVGKKQFINGLMNFAFFLILINL
GIGLSPDPGLVAVMIYTQPIFVLIIERLLGHKITPKGIVGVLLGVVGVISSATLSFNIGLVFGLLAGILWAGGTIYYSRN
LAKEDIVKLNAFMTLTSLPIVLAFTPIDYYFRFSLVTLSLLLLLAILAQILGFYFWFNGVRELGTVYASTGSLLVPVMAY
ITSFAVLGVAPTLPQIIGSLITLFGVYLTITSRS

Sequences:

>Translated_274_residues
MQRTTISFLRWIVPLSLFWGFAFPLTKIIAYSASPMIISAFRIGIAAIFFLILGRGLSVGKKQFINGLMNFAFFLILINL
GIGLSPDPGLVAVMIYTQPIFVLIIERLLGHKITPKGIVGVLLGVVGVISSATLSFNIGLVFGLLAGILWAGGTIYYSRN
LAKEDIVKLNAFMTLTSLPIVLAFTPIDYYFRFSLVTLSLLLLLAILAQILGFYFWFNGVRELGTVYASTGSLLVPVMAY
ITSFAVLGVAPTLPQIIGSLITLFGVYLTITSRS
>Mature_274_residues
MQRTTISFLRWIVPLSLFWGFAFPLTKIIAYSASPMIISAFRIGIAAIFFLILGRGLSVGKKQFINGLMNFAFFLILINL
GIGLSPDPGLVAVMIYTQPIFVLIIERLLGHKITPKGIVGVLLGVVGVISSATLSFNIGLVFGLLAGILWAGGTIYYSRN
LAKEDIVKLNAFMTLTSLPIVLAFTPIDYYFRFSLVTLSLLLLLAILAQILGFYFWFNGVRELGTVYASTGSLLVPVMAY
ITSFAVLGVAPTLPQIIGSLITLFGVYLTITSRS

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29833; Mature: 29833

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTTISFLRWIVPLSLFWGFAFPLTKIIAYSASPMIISAFRIGIAAIFFLILGRGLSVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
KKQFINGLMNFAFFLILINLGIGLSPDPGLVAVMIYTQPIFVLIIERLLGHKITPKGIVG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHH
VLLGVVGVISSATLSFNIGLVFGLLAGILWAGGTIYYSRNLAKEDIVKLNAFMTLTSLPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCH
VLAFTPIDYYFRFSLVTLSLLLLLAILAQILGFYFWFNGVRELGTVYASTGSLLVPVMAY
HEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ITSFAVLGVAPTLPQIIGSLITLFGVYLTITSRS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MQRTTISFLRWIVPLSLFWGFAFPLTKIIAYSASPMIISAFRIGIAAIFFLILGRGLSVG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
KKQFINGLMNFAFFLILINLGIGLSPDPGLVAVMIYTQPIFVLIIERLLGHKITPKGIVG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHH
VLLGVVGVISSATLSFNIGLVFGLLAGILWAGGTIYYSRNLAKEDIVKLNAFMTLTSLPI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCH
VLAFTPIDYYFRFSLVTLSLLLLLAILAQILGFYFWFNGVRELGTVYASTGSLLVPVMAY
HEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
ITSFAVLGVAPTLPQIIGSLITLFGVYLTITSRS
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA