Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
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Accession | NC_002754 |
Length | 2,992,245 |
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The map label for this gene is 15898668
Identifier: 15898668
GI number: 15898668
Start: 1688968
End: 1689495
Strand: Reverse
Name: 15898668
Synonym: SSO1875
Alternate gene names: NA
Gene position: 1689495-1688968 (Counterclockwise)
Preceding gene: 15898669
Following gene: 15898665
Centisome position: 56.46
GC content: 31.25
Gene sequence:
>528_bases ATGGCATATAGGTGCTGCGAGACGACATTTGAAACAGAAAGAGATTTTAAAAAACATATAAGAAGCAAGTATTGGCACAG GATTAATCACTCAGACAGCCTAAACTTGAGAATAAGAAATGATGTCTTGTATAATATCTTGAGAAATCCGAAATTGTTAT TCGGAATATCGAATGTAATTGTCCCAATTCAAGATAAGGCTATAGTATATTTACCATTAAGTAAAGATAAAACGGGACTA GTTTTAAAGCGAAGTATTGTGGGAAAGCTAGAAGGTCCGAAATTGAACATCGACCTTATTGAATACAAATTTACTTCAGA TAAACTAATATATAATTTCGGATTTAAAGTAAGGAAAATAAACGAGGAAAACTCTCAATTGGTTATTTTATCTTCAATGA TGGTTAATATAGGAATTCTTGGTAGACTATTACCAAGTGCAGTCATAAAAGAATTACAGAAAATGGTAACTCCACAAGTG TTTGTTGATAAGTACTTGTCTAAGAATATAAGTTCACTTAGCATATGA
Upstream 100 bases:
>100_bases TATATGATTACATGTTTCAGTAATATGTAATTTTAGTCTTAATAAGGCATTAAAAAGTTCCTAACACAAAAATTAAAGTA AGATTTTTATAGAAAAGCAC
Downstream 100 bases:
>100_bases TTTCATTATAAAACAGCGTGCATCTTTATTGATAAAAGATAAATTCTTTTTTTTATTTATTTATTTAATAAACATCAATT CTACTCACGGTATCAGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MAYRCCETTFETERDFKKHIRSKYWHRINHSDSLNLRIRNDVLYNILRNPKLLFGISNVIVPIQDKAIVYLPLSKDKTGL VLKRSIVGKLEGPKLNIDLIEYKFTSDKLIYNFGFKVRKINEENSQLVILSSMMVNIGILGRLLPSAVIKELQKMVTPQV FVDKYLSKNISSLSI
Sequences:
>Translated_175_residues MAYRCCETTFETERDFKKHIRSKYWHRINHSDSLNLRIRNDVLYNILRNPKLLFGISNVIVPIQDKAIVYLPLSKDKTGL VLKRSIVGKLEGPKLNIDLIEYKFTSDKLIYNFGFKVRKINEENSQLVILSSMMVNIGILGRLLPSAVIKELQKMVTPQV FVDKYLSKNISSLSI >Mature_174_residues AYRCCETTFETERDFKKHIRSKYWHRINHSDSLNLRIRNDVLYNILRNPKLLFGISNVIVPIQDKAIVYLPLSKDKTGLV LKRSIVGKLEGPKLNIDLIEYKFTSDKLIYNFGFKVRKINEENSQLVILSSMMVNIGILGRLLPSAVIKELQKMVTPQVF VDKYLSKNISSLSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20260; Mature: 20129
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYRCCETTFETERDFKKHIRSKYWHRINHSDSLNLRIRNDVLYNILRNPKLLFGISNVI CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCEEEEECCCEE VPIQDKAIVYLPLSKDKTGLVLKRSIVGKLEGPKLNIDLIEYKFTSDKLIYNFGFKVRKI EEECCCEEEEEECCCCCCCEEEEHHHHCCCCCCEEEEEEEEEEECCCEEEEECCEEEEEE NEENSQLVILSSMMVNIGILGRLLPSAVIKELQKMVTPQVFVDKYLSKNISSLSI CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AYRCCETTFETERDFKKHIRSKYWHRINHSDSLNLRIRNDVLYNILRNPKLLFGISNVI CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCEEEEECCCEE VPIQDKAIVYLPLSKDKTGLVLKRSIVGKLEGPKLNIDLIEYKFTSDKLIYNFGFKVRKI EEECCCEEEEEECCCCCCCEEEEHHHHCCCCCCEEEEEEEEEEECCCEEEEECCEEEEEE NEENSQLVILSSMMVNIGILGRLLPSAVIKELQKMVTPQVFVDKYLSKNISSLSI CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA