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The map label for this gene is 15898633

Identifier: 15898633

GI number: 15898633

Start: 1660613

End: 1660981

Strand: Reverse

Name: 15898633

Synonym: SSO1832

Alternate gene names: NA

Gene position: 1660981-1660613 (Counterclockwise)

Preceding gene: 15898634

Following gene: 15898631

Centisome position: 55.51

GC content: 43.09

Gene sequence:

>369_bases
ATGCTAATCGTTAAGAAGAGGAAGAAGATCGTGGTGTACTTCGCGAGGGCGACCAACCTCGACCTACCCAAGAGGGAAGT
GCTGAAGTTGTACAACAAGGTTAGGAGTCCCATTGAGACGTCTTACAGGAACATCAAGGCCTTCCTTCCCTTCACGAGCT
CCACCAAGTTCATCTTCCGCGAGTTGATCTTCGTGCTGGCCATGATCTTCTACTCGCTTTACACCGTGTTTAAGAACGGC
ATGACAAGAGAGGAGTTTAGATTGCTGCTCATCCTCTGCTTTCTAGACGATTTATCTGATCTAAAGGATTTTATATTTAA
TTTTGAGGAAACACTTATTAATACTATAGATTTATTTTTATGGAGGTGA

Upstream 100 bases:

>100_bases
TCTTAATATTATAGCTTATCAATAAACATTTTTCATCTAACCAGGAAAGATTCGTTATATATTTTTAACGTAACGTAAAA
GTGTAACGATTTTCCTATAA

Downstream 100 bases:

>100_bases
TTTTGGGTCTACCGGTTAGGGCGGGGTAGCTCACGAAACTCTTAATTCCATTAGAATAAGATGACTGTATGAGACCTCCC
ATTATCTATGTGTTTTTAAA

Product: second ORF in transposon ISC1225

Products: NA

Alternate protein names: Partial Transposase In ISC; Third ORF In Transposon ISC; Transposase ISC; Partial Transposase ISC

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MLIVKKRKKIVVYFARATNLDLPKREVLKLYNKVRSPIETSYRNIKAFLPFTSSTKFIFRELIFVLAMIFYSLYTVFKNG
MTREEFRLLLILCFLDDLSDLKDFIFNFEETLINTIDLFLWR

Sequences:

>Translated_122_residues
MLIVKKRKKIVVYFARATNLDLPKREVLKLYNKVRSPIETSYRNIKAFLPFTSSTKFIFRELIFVLAMIFYSLYTVFKNG
MTREEFRLLLILCFLDDLSDLKDFIFNFEETLINTIDLFLWR
>Mature_122_residues
MLIVKKRKKIVVYFARATNLDLPKREVLKLYNKVRSPIETSYRNIKAFLPFTSSTKFIFRELIFVLAMIFYSLYTVFKNG
MTREEFRLLLILCFLDDLSDLKDFIFNFEETLINTIDLFLWR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14725; Mature: 14725

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVKKRKKIVVYFARATNLDLPKREVLKLYNKVRSPIETSYRNIKAFLPFTSSTKFIFR
CCEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHH
ELIFVLAMIFYSLYTVFKNGMTREEFRLLLILCFLDDLSDLKDFIFNFEETLINTIDLFL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WR
CC
>Mature Secondary Structure
MLIVKKRKKIVVYFARATNLDLPKREVLKLYNKVRSPIETSYRNIKAFLPFTSSTKFIFR
CCEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHH
ELIFVLAMIFYSLYTVFKNGMTREEFRLLLILCFLDDLSDLKDFIFNFEETLINTIDLFL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA