Click here to switch to the map view.

The map label for this gene is 15898613

Identifier: 15898613

GI number: 15898613

Start: 1642893

End: 1643492

Strand: Reverse

Name: 15898613

Synonym: SSO1812

Alternate gene names: NA

Gene position: 1643492-1642893 (Counterclockwise)

Preceding gene: 15898615

Following gene: 15898612

Centisome position: 54.93

GC content: 37.17

Gene sequence:

>600_bases
ATGGAATTAGATCTGAGACCCATACAACCAGAATATAGACATAAGTTAGTGTTAGAAAGCTTCAGTAAGTTAAAAGAAGG
AGAGGAACTAACAGTAATAGCTGACCACTATCCATCTCATTTAATACAACTATTATCCGGCTATATTGAGAAGTATAAGG
TTGAAGAAACTGCGAATGGTGATTTCGTCTTAAAGCTTACAAAAAAGAAGGGAAGTACTAATAAAGCGATAATTTCGCAT
ATCTCTGAATTTAGAAAGACTGGAGACGTCTTTACTCCAATTCCGGTGCTTAGGAAAGATGAATATGGTGTTATTCTAGT
CTTTTTTAAGCCTGGACAATATATCCCAATACATGCACCAGATTCAGATCTGATCTTTTACGTATTACAAGGTCAAGGAA
AAGTTAGCGTAGACAATAGGGAATATGAAGTGCATGAGGGTTCGATCGTAATAGTACCTAGAGGTATTAAGAGAGGAGTC
AAAGCTGATACTTATATGGAGGCCATTCACATAGTTGTACCAAGTCCCTCACCAGAAGATCACGAAAAGGTAATGAAAGC
AGCTATGAATGGTATTGCAGAAGTCGATCTAAGACACTAG

Upstream 100 bases:

>100_bases
CTCTGAATCTATTCGCAGTTATGAGAAGGTATTCTAAAAACGTAGTAACCCTAATACTTTAGTGCACCATTTTTTATAAC
ATAAGATAATACACTATCCC

Downstream 100 bases:

>100_bases
ATAAACTATATCTTTTTTTATGTAATGACTTTTATACTTTCATCTCTTATTTTAACAAGATGATAACTCTCGTAGGGAAA
ATATTCGACGGAGAAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Domain-Containing Protein

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MELDLRPIQPEYRHKLVLESFSKLKEGEELTVIADHYPSHLIQLLSGYIEKYKVEETANGDFVLKLTKKKGSTNKAIISH
ISEFRKTGDVFTPIPVLRKDEYGVILVFFKPGQYIPIHAPDSDLIFYVLQGQGKVSVDNREYEVHEGSIVIVPRGIKRGV
KADTYMEAIHIVVPSPSPEDHEKVMKAAMNGIAEVDLRH

Sequences:

>Translated_199_residues
MELDLRPIQPEYRHKLVLESFSKLKEGEELTVIADHYPSHLIQLLSGYIEKYKVEETANGDFVLKLTKKKGSTNKAIISH
ISEFRKTGDVFTPIPVLRKDEYGVILVFFKPGQYIPIHAPDSDLIFYVLQGQGKVSVDNREYEVHEGSIVIVPRGIKRGV
KADTYMEAIHIVVPSPSPEDHEKVMKAAMNGIAEVDLRH
>Mature_199_residues
MELDLRPIQPEYRHKLVLESFSKLKEGEELTVIADHYPSHLIQLLSGYIEKYKVEETANGDFVLKLTKKKGSTNKAIISH
ISEFRKTGDVFTPIPVLRKDEYGVILVFFKPGQYIPIHAPDSDLIFYVLQGQGKVSVDNREYEVHEGSIVIVPRGIKRGV
KADTYMEAIHIVVPSPSPEDHEKVMKAAMNGIAEVDLRH

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22550; Mature: 22550

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDLRPIQPEYRHKLVLESFSKLKEGEELTVIADHYPSHLIQLLSGYIEKYKVEETANG
CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHEECCCCCCC
DFVLKLTKKKGSTNKAIISHISEFRKTGDVFTPIPVLRKDEYGVILVFFKPGQYIPIHAP
CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEEECCCCEEEEECC
DSDLIFYVLQGQGKVSVDNREYEVHEGSIVIVPRGIKRGVKADTYMEAIHIVVPSPSPED
CCCEEEEEEECCCEEEECCCEEEEECCCEEEEECCCCCCCCCHHEEEEEEEEECCCCCHH
HEKVMKAAMNGIAEVDLRH
HHHHHHHHHCCCCEEEECC
>Mature Secondary Structure
MELDLRPIQPEYRHKLVLESFSKLKEGEELTVIADHYPSHLIQLLSGYIEKYKVEETANG
CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHEECCCCCCC
DFVLKLTKKKGSTNKAIISHISEFRKTGDVFTPIPVLRKDEYGVILVFFKPGQYIPIHAP
CEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCEEEEEECCCCEEEEECC
DSDLIFYVLQGQGKVSVDNREYEVHEGSIVIVPRGIKRGVKADTYMEAIHIVVPSPSPED
CCCEEEEEEECCCEEEECCCEEEEECCCEEEEECCCCCCCCCHHEEEEEEEEECCCCCHH
HEKVMKAAMNGIAEVDLRH
HHHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA