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The map label for this gene is 15898597

Identifier: 15898597

GI number: 15898597

Start: 1629186

End: 1629626

Strand: Reverse

Name: 15898597

Synonym: SSO1800

Alternate gene names: NA

Gene position: 1629626-1629186 (Counterclockwise)

Preceding gene: 15898598

Following gene: 15898593

Centisome position: 54.46

GC content: 44.44

Gene sequence:

>441_bases
ATGGGGTTCAATGACGTTTTTCTCCTCATGGGTTATACTACTTCCAAGCTCAAGAGCTTCACAGCCTTTAGGAAGTATAA
GGGTTGGGGTAGGAAGCACGGTAAGTCCTACTTCGGGTTTAAGGTCTGTAACCTTGTGGAAAGGAGGACTAATTTCGTTA
GGGGCTTCAAGGTTGGATTGGCTAATTTGAGGGATCTAGCCTTTTCATTTGATAACGTTAAGTTAATGGCCGATAGGGCT
TGGATTTTTAGGGAGGACGTCTTAGTTAAGGGTGTTGGTAGTGCTGGACTTCCGGTTGAGGGTAGTGGTGTTGAGATTAG
GGAAGGTAAGGCTTCGTCTACAACCTTAAGGGGAGTGGTTATGGAGGTATTCTTCCTTAACCTCTATCGTGATCTCGAAA
TTCTTTCGACGAGGATTAGGACGAAGGTACTCGTTAATTAA

Upstream 100 bases:

>100_bases
CGAGGACTACCACATAATTGACACATTCTTCCGTGAAGCCTACCCAGGAAAGAGGAGTCTTCAAAACGGTCTTGAGAAGA
TCTCACTTGACCTTAAGGAG

Downstream 100 bases:

>100_bases
CGAGGTTCGTTTACGTGTTTACTTGTTGTTATGATAAATTTTATTGCAAAATTGTACAATTATCTGTATTTTCCCTTATT
AATACATATTATATTATTTT

Product: second ORF in transposon ISC1212

Products: NA

Alternate protein names: ORF2 In Transposon ISC; Partial Transposase In ISC

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MGFNDVFLLMGYTTSKLKSFTAFRKYKGWGRKHGKSYFGFKVCNLVERRTNFVRGFKVGLANLRDLAFSFDNVKLMADRA
WIFREDVLVKGVGSAGLPVEGSGVEIREGKASSTTLRGVVMEVFFLNLYRDLEILSTRIRTKVLVN

Sequences:

>Translated_146_residues
MGFNDVFLLMGYTTSKLKSFTAFRKYKGWGRKHGKSYFGFKVCNLVERRTNFVRGFKVGLANLRDLAFSFDNVKLMADRA
WIFREDVLVKGVGSAGLPVEGSGVEIREGKASSTTLRGVVMEVFFLNLYRDLEILSTRIRTKVLVN
>Mature_145_residues
GFNDVFLLMGYTTSKLKSFTAFRKYKGWGRKHGKSYFGFKVCNLVERRTNFVRGFKVGLANLRDLAFSFDNVKLMADRAW
IFREDVLVKGVGSAGLPVEGSGVEIREGKASSTTLRGVVMEVFFLNLYRDLEILSTRIRTKVLVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16576; Mature: 16444

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFNDVFLLMGYTTSKLKSFTAFRKYKGWGRKHGKSYFGFKVCNLVERRTNFVRGFKVGL
CCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ANLRDLAFSFDNVKLMADRAWIFREDVLVKGVGSAGLPVEGSGVEIREGKASSTTLRGVV
HHHHHHHHCCCCEEEEECCHHHHHHHHHEEECCCCCCCCCCCCEEEECCCCCHHHHHHHH
MEVFFLNLYRDLEILSTRIRTKVLVN
HHHHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
GFNDVFLLMGYTTSKLKSFTAFRKYKGWGRKHGKSYFGFKVCNLVERRTNFVRGFKVGL
CCCCEEEEECCCHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ANLRDLAFSFDNVKLMADRAWIFREDVLVKGVGSAGLPVEGSGVEIREGKASSTTLRGVV
HHHHHHHHCCCCEEEEECCHHHHHHHHHEEECCCCCCCCCCCCEEEECCCCCHHHHHHHH
MEVFFLNLYRDLEILSTRIRTKVLVN
HHHHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA