Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
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Accession | NC_002754 |
Length | 2,992,245 |
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The map label for this gene is 15898572
Identifier: 15898572
GI number: 15898572
Start: 1606108
End: 1606950
Strand: Reverse
Name: 15898572
Synonym: SSO1774
Alternate gene names: NA
Gene position: 1606950-1606108 (Counterclockwise)
Preceding gene: 15898573
Following gene: 15898571
Centisome position: 53.7
GC content: 29.06
Gene sequence:
>843_bases GTGAGTATTATTAATGATGAGAAATTACGTAAATATGTTCCAGAAGAAAGATTAGATAAAGTAAAAGAGAGGCTAGAAAT TTTAGACACATATGATCTATCATATATTACATCAAATTTCATATGGAAAGGACGCAGATTTTCTCCAGAACAAGTTTGGC CTATAAAAATTTATTATGGGAAAGCGGATAGAGAATTAGCTGAAAAGATTGAAAAAGAATTTAGGCGATTTGTAGCATTA ACGATTGTTTTCCCTAAAAGGTTATTTACTGCAAGTGGCGCTGTGGATCTATATTGGCACTTTCTTATTCTTCATACAAA GGAATACGAAAAATTTAGCAAAAGTGTTTGGGGAATACCTAGATATGATAATGTTTTATTAAAGAAATTATTAAATAATG ATGATAATAGTTTCAGATTAAGATTTAATTTAAAACCTGATAATGTAAACGAAATAACTATATTACCTAAAAAGGCTTTA GAATCGTTGGATGATAAGACTTTAGATCGAGTACTCATGCTTGAAAGATTAGACCTATCACCTATATCAGAAAATTTACT TCATACTATTGATGAGTTTAAATTTGTGCCGGAACAAAGATTTCCATTAATAGCACATTTTGGTAAACTAGATAATAATA TAGTAAAAAGAATAGAGTTAGAATTTAAAAAATGGATGGCTCTAAATATAGCATATGGTGGAAAGGAATTGAATTATGCA GCACCAAGTGGTGTAGTAGACATGTATTTCCATCTGTTTATTCTTCATACTATATTATATAAACAGTTTTGCGAAATATT TTTTGGAAAATTCATACATCATCCATTGGGTGAACTTTTCTGA
Upstream 100 bases:
>100_bases GTGCATTTGTGGATTATGACGAAAAGAAATATCCAGAAGAAGAGTATAAAGATCCATTTGAATAATTTTTTGAGAAATAT TTTTTTCTAGAGGTGATTTT
Downstream 100 bases:
>100_bases AAGATAAAATTATTTTTTCTGTAAATATTATAAGATTTTCATCATTAACCGCAATATGGACTTATACTGGTATAGCTCTT TATGATTTTTATCACTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSIINDEKLRKYVPEERLDKVKERLEILDTYDLSYITSNFIWKGRRFSPEQVWPIKIYYGKADRELAEKIEKEFRRFVAL TIVFPKRLFTASGAVDLYWHFLILHTKEYEKFSKSVWGIPRYDNVLLKKLLNNDDNSFRLRFNLKPDNVNEITILPKKAL ESLDDKTLDRVLMLERLDLSPISENLLHTIDEFKFVPEQRFPLIAHFGKLDNNIVKRIELEFKKWMALNIAYGGKELNYA APSGVVDMYFHLFILHTILYKQFCEIFFGKFIHHPLGELF
Sequences:
>Translated_280_residues MSIINDEKLRKYVPEERLDKVKERLEILDTYDLSYITSNFIWKGRRFSPEQVWPIKIYYGKADRELAEKIEKEFRRFVAL TIVFPKRLFTASGAVDLYWHFLILHTKEYEKFSKSVWGIPRYDNVLLKKLLNNDDNSFRLRFNLKPDNVNEITILPKKAL ESLDDKTLDRVLMLERLDLSPISENLLHTIDEFKFVPEQRFPLIAHFGKLDNNIVKRIELEFKKWMALNIAYGGKELNYA APSGVVDMYFHLFILHTILYKQFCEIFFGKFIHHPLGELF >Mature_279_residues SIINDEKLRKYVPEERLDKVKERLEILDTYDLSYITSNFIWKGRRFSPEQVWPIKIYYGKADRELAEKIEKEFRRFVALT IVFPKRLFTASGAVDLYWHFLILHTKEYEKFSKSVWGIPRYDNVLLKKLLNNDDNSFRLRFNLKPDNVNEITILPKKALE SLDDKTLDRVLMLERLDLSPISENLLHTIDEFKFVPEQRFPLIAHFGKLDNNIVKRIELEFKKWMALNIAYGGKELNYAA PSGVVDMYFHLFILHTILYKQFCEIFFGKFIHHPLGELF
Specific function: Unknown
COG id: COG4278
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33388; Mature: 33257
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIINDEKLRKYVPEERLDKVKERLEILDTYDLSYITSNFIWKGRRFSPEQVWPIKIYYG CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEC KADRELAEKIEKEFRRFVALTIVFPKRLFTASGAVDLYWHFLILHTKEYEKFSKSVWGIP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC RYDNVLLKKLLNNDDNSFRLRFNLKPDNVNEITILPKKALESLDDKTLDRVLMLERLDLS CHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEECHHHHHHCCHHHHHHHHHHHHCCCC PISENLLHTIDEFKFVPEQRFPLIAHFGKLDNNIVKRIELEFKKWMALNIAYGGKELNYA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCC APSGVVDMYFHLFILHTILYKQFCEIFFGKFIHHPLGELF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIINDEKLRKYVPEERLDKVKERLEILDTYDLSYITSNFIWKGRRFSPEQVWPIKIYYG CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEC KADRELAEKIEKEFRRFVALTIVFPKRLFTASGAVDLYWHFLILHTKEYEKFSKSVWGIP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC RYDNVLLKKLLNNDDNSFRLRFNLKPDNVNEITILPKKALESLDDKTLDRVLMLERLDLS CHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEECHHHHHHCCHHHHHHHHHHHHCCCC PISENLLHTIDEFKFVPEQRFPLIAHFGKLDNNIVKRIELEFKKWMALNIAYGGKELNYA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCC APSGVVDMYFHLFILHTILYKQFCEIFFGKFIHHPLGELF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA